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Intrinsic disorder and other malleable arsenals of evolved protein multifunctionality
Microscopic evolution at the functional biomolecular level is an ongoing process.
Leveraging functional and high-throughput assays, along with computational data mining …
Leveraging functional and high-throughput assays, along with computational data mining …
Benchmarking methods for PROTAC ternary complex structure prediction
Proteolysis targeting chimeras (PROTACs) are bifunctional compounds that recruit an E3
ligase to a target protein to induce ubiquitination and degradation of the target. Rational …
ligase to a target protein to induce ubiquitination and degradation of the target. Rational …
[HTML][HTML] Recent Advances in Mass Spectrometry-based Protein Interactome Studies
The foundation of all biological processes is the network of diverse and dynamic protein
interactions with other molecules in cells known as the interactome. Understanding the …
interactions with other molecules in cells known as the interactome. Understanding the …
Structural basis for the conformational protection of nitrogenase from O2
The low reduction potentials required for the reduction of dinitrogen (N2) render metal-
based nitrogen-fixation catalysts vulnerable to irreversible damage by dioxygen (O2) …
based nitrogen-fixation catalysts vulnerable to irreversible damage by dioxygen (O2) …
Elucidation of the noncovalent interactions driving enzyme activity guides branching enzyme engineering for α-glucan modification
Z Zong, X Zhang, P Chen, Z Fu, Y Zeng… - Nature …, 2024 - nature.com
Branching enzymes (BEs) confer to α-glucans, the primary energy-storage reservoir in
nature, a variety of features, like slow digestion. The full catalytic cycle of BEs can be divided …
nature, a variety of features, like slow digestion. The full catalytic cycle of BEs can be divided …
Discovery of highly bioactive peptides through hierarchical structural information and molecular dynamics simulations
Peptide drugs play an essential role in modern therapeutics, but the computational design of
these molecules is hindered by several challenges. Traditional methods like molecular …
these molecules is hindered by several challenges. Traditional methods like molecular …
Nuclear adenine activates hnRNPA2B1 to enhance antibacterial innate immunity
S Zhang, Z Cui, D Zhang, D Zhang, K **, Z Li, B Li… - Cell Metabolism, 2025 - cell.com
Bacterial infection reprograms cellular metabolism and epigenetic status, but how the
metabolic-epigenetic crosstalk empowers host antibacterial defense remains unclear. Here …
metabolic-epigenetic crosstalk empowers host antibacterial defense remains unclear. Here …
[HTML][HTML] Evaluation of Structure Prediction and Molecular Docking Tools for Therapeutic Peptides in Clinical Use and Trials Targeting Coronary Artery Disease
This study evaluates the performance of various structure prediction tools and molecular
docking platforms for therapeutic peptides targeting coronary artery disease (CAD) …
docking platforms for therapeutic peptides targeting coronary artery disease (CAD) …
In silico antiviral effect assessment of some venom gland peptides from Odontobuthus doriae scorpion against SARS-CoV-2
MN Soorki - Toxicon, 2025 - Elsevier
SARS-CoV-2 is from the enveloped virus family responsible for the COVID-19 pandemic. No
efficient drugs are currently available to treat infection explicitly caused by this virus …
efficient drugs are currently available to treat infection explicitly caused by this virus …
G-quadruplex-forming small RNA inhibits coronavirus and influenza A virus replication
R Sekine, K Takeda, T Suenaga, S Tsuno… - Communications …, 2025 - nature.com
Future pandemic threats may be caused by novel coronaviruses and influenza A viruses.
Here we show that when directly added to a cell culture, 12mer guanine RNA (G12) and its …
Here we show that when directly added to a cell culture, 12mer guanine RNA (G12) and its …