[PDF][PDF] A review of pangenome tools and recent studies
GS Vernikos - The pangenome: diversity, dynamics and evolution …, 2020 - library.oapen.org
With the advance of sequencing technologies, the landscape of genomic analysis has been
transformed, by moving from single strain to species (or even higher taxa)-wide genomic …
transformed, by moving from single strain to species (or even higher taxa)-wide genomic …
Design of PCR assays to specifically detect and identify 37 Lactobacillus species in a single 96 well plate
Background Lactobacillus species are used as probiotics and play an important role in
fermented food production. However, use of 16S rRNA gene sequences as standard …
fermented food production. However, use of 16S rRNA gene sequences as standard …
Comparative pangenomics: analysis of 12 microbial pathogen pangenomes reveals conserved global structures of genetic and functional diversity
Background With the exponential growth of publicly available genome sequences,
pangenome analyses have provided increasingly complete pictures of genetic diversity for …
pangenome analyses have provided increasingly complete pictures of genetic diversity for …
The pint-sized powerhouse: Illuminating the mighty role of the gut microbiome in improving the outcome of anti-cancer therapy
Cancer persists as a major health catastrophe and a leading cause of widespread mortality
across every nation. Research of several decades has increased our understanding of the …
across every nation. Research of several decades has increased our understanding of the …
Pangenomics in microbial and crop research: Progress, applications, and perspectives
Advances in sequencing technologies and bioinformatics tools have fueled a renewed
interest in whole genome sequencing efforts in many organisms. The growing availability of …
interest in whole genome sequencing efforts in many organisms. The growing availability of …
Charting host-microbe co-metabolism in skin aging and application to metagenomics data
During aging of human skin, a number of intrinsic and extrinsic factors cause the alteration of
the skin's structure, function and cutaneous physiology. Many studies have investigated the …
the skin's structure, function and cutaneous physiology. Many studies have investigated the …
DIAMOND+ MEGAN Microbiome Analysis
Metagenomics is the study of microbiomes using DNA sequencing technologies. Basic
computational tasks are to determine the taxonomic composition (who is out there?), the …
computational tasks are to determine the taxonomic composition (who is out there?), the …
Genome and pan-genome analysis of a new exopolysaccharide-producing bacterium Pyschrobacillus sp. isolated from iron ores deposit and insights into iron uptake
A Najjari, M Jabberi, SF Chérif, A Cherif… - Frontiers in …, 2024 - frontiersin.org
Bacterial exopolysaccharides (EPS) have emerged as one of the key players in the field of
heavy metal-contaminated environmental bioremediation. This study aimed to characterize …
heavy metal-contaminated environmental bioremediation. This study aimed to characterize …
Application of pan-genomic on the monitoring of foodborne pathogens and antimicrobial resistance.
ZY Li, CL Shi - 2022 - cabidigitallibrary.org
Foodborne diseases caused by foodborne pathogens break out all over the world. The
investigation and monitoring of foodborne pathogens is an effective method to prevent and …
investigation and monitoring of foodborne pathogens is an effective method to prevent and …
泛基因组学在食源性致病菌检测及其 耐药监测中的应用.
黎梓怡， 施春雷 - Journal of Food Safety & Quality, 2022 - search.ebscohost.com
食源性致病菌引起的食源性疾病在全球范围内时有暴发, 对致病菌的调查和监测是预防和控制
疾病大范围发生的有效手段. 然而菌株的遗传变异给监测工作带来了挑战, 同时罕见的 …
疾病大范围发生的有效手段. 然而菌株的遗传变异给监测工作带来了挑战, 同时罕见的 …