Natural products targeting strategies involving molecular networking: different manners, one goal

AEF Ramos, L Evanno, E Poupon, P Champy… - Natural product …, 2019‏ - pubs.rsc.org
Covering: up to 2019 Landmark advances in bioinformatics tools have recently enhanced
the field of natural products research, putting today's natural product chemists in the …

Reproducible molecular networking of untargeted mass spectrometry data using GNPS

AT Aron, EC Gentry, KL McPhail, LF Nothias… - Nature protocols, 2020‏ - nature.com
Abstract Global Natural Product Social Molecular Networking (GNPS) is an interactive online
small molecule–focused tandem mass spectrometry (MS2) data curation and analysis …

[HTML][HTML] MolNetEnhancer: enhanced molecular networks by integrating metabolome mining and annotation tools

M Ernst, KB Kang, AM Caraballo-Rodríguez… - Metabolites, 2019‏ - mdpi.com
Metabolomics has started to embrace computational approaches for chemical interpretation
of large data sets. Yet, metabolite annotation remains a key challenge. Recently, molecular …

Good practices and recommendations for using and benchmarking computational metabolomics metabolite annotation tools

NF de Jonge, K Mildau, D Meijer, JJR Louwen… - Metabolomics, 2022‏ - Springer
Background Untargeted metabolomics approaches based on mass spectrometry obtain
comprehensive profiles of complex biological samples. However, on average only 10% of …

Innovative omics-based approaches for prioritisation and targeted isolation of natural products–new strategies for drug discovery

JL Wolfender, M Litaudon, D Touboul… - Natural product …, 2019‏ - pubs.rsc.org
Covering: 2013 to 2019 The exploration of the chemical diversity of extracts from various
biological sources has led to major drug discoveries. Over the past two decades, despite the …

Concepts and methods to access novel antibiotics from actinomycetes

JJ Hug, CD Bader, M Remškar, K Cirnski, R Müller - Antibiotics, 2018‏ - mdpi.com
Actinomycetes have been proven to be an excellent source of secondary metabolites for
more than half a century. Exhibiting various bioactivities, they provide valuable approved …

[HTML][HTML] Insight into chemical basis of traditional Chinese medicine based on the state-of-the-art techniques of liquid chromatography− mass spectrometry

Y Yu, C Yao, D Guo - Acta Pharmaceutica Sinica B, 2021‏ - Elsevier
Traditional Chinese medicine (TCM) has been an indispensable source of drugs for curing
various human diseases. However, the inherent chemical diversity and complexity of TCM …

Omics and multi-omics approaches to study the biosynthesis of secondary metabolites in microorganisms

E Palazzotto, T Weber - Current opinion in microbiology, 2018‏ - Elsevier
Highlights•Microorganisms are a prolific source of highly bioactive compounds.•Omics
approaches to unveil biosynthetic gene clusters encoding new natural product.•Use multi …