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Turning single-molecule localization microscopy into a quantitative bioanalytical tool
Single-molecule localization microscopy (SMLM) generates super-resolution images by
serially detecting individual fluorescent molecules. The power of SMLM, however, goes …
serially detecting individual fluorescent molecules. The power of SMLM, however, goes …
Visualization and characterization of individual type III protein secretion machines in live bacteria
Type III protein secretion machines have evolved to deliver bacterially encoded effector
proteins into eukaryotic cells. Although electron microscopy has provided a detailed view of …
proteins into eukaryotic cells. Although electron microscopy has provided a detailed view of …
Correction of multiple-blinking artifacts in photoactivated localization microscopy
Photoactivated localization microscopy (PALM) produces an array of localization
coordinates by means of photoactivatable fluorescent proteins. However, observations are …
coordinates by means of photoactivatable fluorescent proteins. However, observations are …
A pairwise distance distribution correction (DDC) algorithm to eliminate blinking-caused artifacts in SMLM
Single-molecule localization microscopy (SMLM) relies on the blinking behavior of a
fluorophore, which is the stochastic switching between fluorescent and dark states. Blinking …
fluorophore, which is the stochastic switching between fluorescent and dark states. Blinking …
CRISPR-Cas9 mediated labelling allows for single molecule imaging and resolution
Single molecule imaging approaches like dSTORM and PALM resolve structures at 10–20
nm, and allow for unique insights into protein stoichiometry and spatial relationships …
nm, and allow for unique insights into protein stoichiometry and spatial relationships …
Analyzing protein clusters on the plasma membrane: application of spatial statistical analysis methods on super-resolution microscopy images
The spatial distribution of proteins within the cell affects their capability to interact with other
molecules and directly influences cellular processes and signaling. At the plasma …
molecules and directly influences cellular processes and signaling. At the plasma …
Inhomogeneity based characterization of distribution patterns on the plasma membrane
Cell surface protein and lipid molecules are organized in various patterns: randomly, along
gradients, or clustered when segregated into discrete micro-and nano-domains. Their …
gradients, or clustered when segregated into discrete micro-and nano-domains. Their …
On characterizing protein spatial clusters with correlation approaches
Spatial aggregation of proteins might have functional importance, eg, in signaling, and nano-
imaging can be used to study them. Such studies require accurate characterization of …
imaging can be used to study them. Such studies require accurate characterization of …
StormGraph: a graph-based algorithm for quantitative clustering analysis of diverse single-molecule localization microscopy data
JM Scurll, L Abraham, DW Zheng, R Tafteh, KC Chou… - BioRxiv, 2019 - biorxiv.org
Clustering of proteins is crucial for many cellular processes and can be imaged at nanoscale
resolution using single-molecule localization microscopy (SMLM). Ideally, molecular …
resolution using single-molecule localization microscopy (SMLM). Ideally, molecular …
[HTML][HTML] The accuracy of determining cluster size by analyzing Ripley's K function in single molecule localization microscopy
Y Ruan, P Yin, F Li, D Li, Q Lin, K Li - Applied Sciences, 2019 - mdpi.com
Ripley's K function was developed to analyze the spatial distribution characteristics in point
pattern analysis, including geography, economics and biomedical research. In biomedical …
pattern analysis, including geography, economics and biomedical research. In biomedical …