Harnessing genomics to fast-track genetic improvement in aquaculture

RD Houston, TP Bean, DJ Macqueen… - Nature Reviews …, 2020 - nature.com
Aquaculture is the fastest-growing farmed food sector and will soon become the primary
source of fish and shellfish for human diets. In contrast to crop and livestock production …

Applications of genoty** by sequencing in aquaculture breeding and genetics

D Robledo, C Palaiokostas, L Bargelloni… - Reviews in …, 2018 - Wiley Online Library
Selective breeding is increasingly recognized as a key component of sustainable production
of aquaculture species. The uptake of genomic technology in aquaculture breeding has …

Lost in parameter space: a road map for stacks

JR Paris, JR Stevens… - Methods in Ecology and …, 2017 - Wiley Online Library
Restriction site‐Associated DNA sequencing (RAD‐seq) has become a widely adopted
method for genoty** populations of model and non‐model organisms. Generating a …

The European sea bass: a key marine fish model in the wild and in aquaculture

M Vandeputte, PA Gagnaire, F Allal - Animal genetics, 2019 - Wiley Online Library
Summary The European sea bass (Dicentrarchus labrax L.) is a marine fish of key economic
and cultural importance in Europe. It is now more an aquaculture than a fisheries species (> …

Viral encephalopathy and retinopathy in aquaculture: a review

QK Doan, M Vandeputte, B Chatain… - Journal of fish …, 2017 - Wiley Online Library
Viral encephalopathy and retinopathy (VER), otherwise known as viral nervous necrosis
(VNN), is a major devastating threat for aquatic animals. Betanodaviruses have been …

Research advances in the genomics and applications for molecular breeding of aquaculture animals

X You, X Shan, Q Shi - Aquaculture, 2020 - Elsevier
High-throughput sequencing technologies have been extensively applied to genetics and
breeding in the aquaculture industry. To date, many aquaculture animal genomes have …

Genomic Prediction of Resistance to Pasteurellosis in Gilthead Sea Bream (Sparus aurata) Using 2b-RAD Sequencing

C Palaiokostas, S Ferraresso, R Franch… - G3: Genes …, 2016 - academic.oup.com
Gilthead sea bream (Sparus aurata) is a species of paramount importance to the
Mediterranean aquaculture industry, with an annual production exceeding 140,000 metric …

Sex-specific markers developed by next-generation sequencing confirmed an XX/XY sex determination system in bighead carp (Hypophthalmichthys nobilis) and …

H Liu, M Pang, X Yu, Y Zhou, J Tong, B Fu - Dna Research, 2018 - academic.oup.com
Sex-specific markers are powerful tools for identifying sex-determination system in various
animals. Bighead carp (Hypophthalmichthys nobilis) and silver carp (Hypophthalmichthys …

Current status of genome sequencing and its applications in aquaculture

GH Yue, L Wang - Aquaculture, 2017 - Elsevier
Aquaculture is the fastest-growing food production sector in agriculture, with great potential
to meet projected protein needs of human beings. Aquaculture is facing several challenges …

Dynamic epimarks in sex-related genes predict gonad phenotype in the European sea bass, a fish with mixed genetic and environmental sex determination

D Anastasiadi, M Vandeputte, N Sanchez-Baizan… - Epigenetics, 2018 - Taylor & Francis
The integration of genomic and environmental influences into methylation patterns to bring
about a phenotype is of central interest in developmental epigenetics, but many details are …