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Experimental Evolution with Caenorhabditis Nematodes
The hermaphroditic nematode Caenorhabditis elegans has been one of the primary model
systems in biology since the 1970s, but only within the last two decades has this nematode …
systems in biology since the 1970s, but only within the last two decades has this nematode …
Examining sources of error in PCR by single-molecule sequencing
Next-generation sequencing technology has enabled the detection of rare genetic or
somatic mutations and contributed to our understanding of disease progression and …
somatic mutations and contributed to our understanding of disease progression and …
Excess of mutational jackpot events in expanding populations revealed by spatial Luria–Delbrück experiments
The genetic diversity of growing cellular populations, such as biofilms, solid tumours or
develo** embryos, is thought to be dominated by rare, exceptionally large mutant clones …
develo** embryos, is thought to be dominated by rare, exceptionally large mutant clones …
Drivers of within-host genetic diversity in acute infections of viruses
Genetic diversity is the fuel of evolution and facilitates adaptation to novel environments.
However, our understanding of what drives differences in the genetic diversity during the …
However, our understanding of what drives differences in the genetic diversity during the …
Measurement error and variant-calling in deep Illumina sequencing of HIV
M Howison, M Coetzer, R Kantor - Bioinformatics, 2019 - academic.oup.com
Motivation Next-generation deep sequencing of viral genomes, particularly on the Illumina
platform, is increasingly applied in HIV research. Yet, there is no standard protocol or …
platform, is increasingly applied in HIV research. Yet, there is no standard protocol or …
Genotype‐phenotype analysis of MT‐ATP6‐associated Leigh syndrome
JH Na, YM Lee - Acta Neurologica Scandinavica, 2022 - Wiley Online Library
Abstract Objectives Mitochondrial DNA (mtDNA)‐associated Leigh syndrome (LS) is
characterized by maternal inheritance, and the heteroplasmic mutant load of mtDNA …
characterized by maternal inheritance, and the heteroplasmic mutant load of mtDNA …
Association Between Epilepsy and Leigh Syndrome With MT-ND3 Mutation, Particularly the m.10191T>C Point Mutation
JH Na, MJ Lee, CH Lee, YM Lee - Frontiers in Neurology, 2021 - frontiersin.org
Background and Purpose: Recent advances in molecular genetic testing have led to a rapid
increase in the understanding of the genetics of Leigh syndrome. Several studies have …
increase in the understanding of the genetics of Leigh syndrome. Several studies have …
Heteroplasmic mutant load differences in mitochondrial DNA-associated Leigh syndrome
JH Na, YM Lee - Pediatric Neurology, 2023 - Elsevier
Abstract Background Mitochondrial DNA (mtDNA)-associated Leigh syndrome is influenced
by mutant pathogenicity and corresponding heteroplasmic loads; however, the manner in …
by mutant pathogenicity and corresponding heteroplasmic loads; however, the manner in …
FERMI: a novel method for sensitive detection of rare mutations in somatic tissue
With growing interest in monitoring mutational processes in normal tissues, tumor
heterogeneity, and cancer evolution under therapy, the ability to accurately and …
heterogeneity, and cancer evolution under therapy, the ability to accurately and …
Epigenetic loss of heterozygosity of Apc and an inflammation-associated mutational signature detected in Lrig1+/−-driven murine colonic adenomas
JL Preston, N Stiffler - BMC cancer, 2020 - Springer
Background The loss of a single copy of adenomatous polyposis coli (Apc) in leucine-rich
repeats and immunoglobulin-like domains 1 (Lrig1)-expressing colonic progenitor cells …
repeats and immunoglobulin-like domains 1 (Lrig1)-expressing colonic progenitor cells …