Phylogenomics and the flowering plant tree of life
The advances accelerated by next‐generation sequencing and long‐read sequencing
technologies continue to provide an impetus for plant phylogenetic study. In the past …
technologies continue to provide an impetus for plant phylogenetic study. In the past …
An updated tribal classification of Lamiaceae based on plastome phylogenomics
Background A robust molecular phylogeny is fundamental for develo** a stable
classification and providing a solid framework to understand patterns of diversification …
classification and providing a solid framework to understand patterns of diversification …
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes
GetOrganelle is a state-of-the-art toolkit to accurately assemble organelle genomes from
whole genome sequencing data. It recruits organelle-associated reads using a modified …
whole genome sequencing data. It recruits organelle-associated reads using a modified …
Angiosperms at the edge: Extremity, diversity, and phylogeny
A hallmark of flowering plants is their ability to invade some of the most extreme and
dynamic habitats, including cold and dry biomes, to a far greater extent than other land …
dynamic habitats, including cold and dry biomes, to a far greater extent than other land …
GetOrganelle: a simple and fast pipeline for de novo assembly of a complete circular chloroplast genome using genome skimming data
Background: Chloroplast genes and genomes are the most important genomic data for plant
phylogeny and DNA barcoding. Since the rapid development of high throughput sequencing …
phylogeny and DNA barcoding. Since the rapid development of high throughput sequencing …
Evolutionary history and pan-genome dynamics of strawberry (Fragaria spp.)
Q Qiao, PP Edger, L Xue, L Qiong… - Proceedings of the …, 2021 - National Acad Sciences
Strawberry (Fragaria spp.) has emerged as a model system for various fundamental and
applied research in recent years. In total, the genomes of five different species have been …
applied research in recent years. In total, the genomes of five different species have been …
Exploration of plastid phylogenomic conflict yields new insights into the deep relationships of Leguminosae
Phylogenomic analyses have helped resolve many recalcitrant relationships in the
angiosperm tree of life, yet phylogenetic resolution of the backbone of the Leguminosae …
angiosperm tree of life, yet phylogenetic resolution of the backbone of the Leguminosae …
Phylogeny, biogeography and diversification of the mining bee family Andrenidae
The mining bees (Andrenidae) are a major bee family of over 3000 described species with a
nearly global distribution. They are a particularly significant component of northern …
nearly global distribution. They are a particularly significant component of northern …
A plastid phylogenomic framework for the palm family (Arecaceae)
Background Over the past decade, phylogenomics has greatly advanced our knowledge of
angiosperm evolution. However, phylogenomic studies of large angiosperm families with …
angiosperm evolution. However, phylogenomic studies of large angiosperm families with …
Comparative analysis of the complete chloroplast genome among Prunus mume, P. armeniaca, and P. salicina
Abstract Prunus mume Sieb. et Zucc., P. armeniaca L., and P. salicina L. are economically
important fruit trees in temperate regions. These species are taxonomically perplexing …
important fruit trees in temperate regions. These species are taxonomically perplexing …