Systematic coarse-graining methods for soft matter simulations–a review

E Brini, EA Algaer, P Ganguly, C Li… - Soft Matter, 2013 - pubs.rsc.org
Multiscale modelling of soft matter is an emerging field that has made rapid progress in the
past decade. Several methods for systematic coarse-graining of molecular liquids and soft …

A review of multiscale computational methods in polymeric materials

A Gooneie, S Schuschnigg, C Holzer - Polymers, 2017 - mdpi.com
Polymeric materials display distinguished characteristics which stem from the interplay of
phenomena at various length and time scales. Further development of polymer systems …

The ground state electronic energy of benzene

JJ Eriksen, TA Anderson, JE Deustua… - The journal of …, 2020 - ACS Publications
We report on the findings of a blind challenge devoted to determining the frozen-core, full
configuration interaction (FCI) ground-state energy of the benzene molecule in a standard …

Understanding and modeling polymers: The challenge of multiple scales

F Schmid - ACS Polymers Au, 2022 - ACS Publications
Polymer materials are multiscale systems by definition. Already the description of a single
macromolecule involves a multitude of scales, and cooperative processes in polymer …

Iterative reconstruction of memory kernels

G Jung, M Hanke, F Schmid - Journal of chemical theory and …, 2017 - ACS Publications
In recent years, it has become increasingly popular to construct coarse-grained models with
non-Markovian dynamics to account for an incomplete separation of time scales. One …

Multiscale modeling of soft matter: scaling of dynamics

D Fritz, K Koschke, VA Harmandaris… - Physical Chemistry …, 2011 - pubs.rsc.org
Many physical phenomena and properties of soft matter systems are characterized by an
interplay of interactions and processes that span a wide range of length-and time scales …

Hybrid simulations: combining atomistic and coarse-grained force fields using virtual sites

AJ Rzepiela, M Louhivuori, C Peter… - Physical Chemistry …, 2011 - pubs.rsc.org
Hybrid simulations, in which part of the system is represented at atomic resolution and the
remaining part at a reduced, coarse-grained, level offer a powerful way to combine the …

Many-body coarse-grained interactions using Gaussian approximation potentials

ST John, G Csányi - The Journal of Physical Chemistry B, 2017 - ACS Publications
We introduce a computational framework that is able to describe general many-body coarse-
grained (CG) interactions of molecules and use it to model the free energy surface of …

The impact of resolution upon entropy and information in coarse-grained models

TT Foley, MS Shell, WG Noid - The Journal of chemical physics, 2015 - pubs.aip.org
By eliminating unnecessary degrees of freedom, coarse-grained (CG) models tremendously
facilitate numerical calculations and theoretical analyses of complex phenomena. However …

Mixing MARTINI: electrostatic coupling in hybrid atomistic–coarse-grained biomolecular simulations

TA Wassenaar, HI Ingólfsson, M Prieß… - The Journal of …, 2013 - ACS Publications
Hybrid molecular dynamics simulations of atomistic (AA) solutes embedded in coarse-
grained (CG) environment can substantially reduce the computational cost with respect to …