Conformational diversity and protein evolution–a 60-year-old hypothesis revisited
Complex organisms have evolved from a limited number of primordial genes and proteins.
However, the mechanisms by which the earliest proteins evolved and then served as the …
However, the mechanisms by which the earliest proteins evolved and then served as the …
Formamide and the origin of life
The complexity of life boils down to the definition:“self-sustained chemical system capable of
undergoing Darwinian evolution”(Joyce, 1994)[1]. The term “self-sustained” implies a set of …
undergoing Darwinian evolution”(Joyce, 1994)[1]. The term “self-sustained” implies a set of …
A universal trend of amino acid gain and loss in protein evolution
Amino acid composition of proteins varies substantially between taxa and, thus, can evolve.
For example, proteins from organisms with (G+ C)-rich (or (A+ T)-rich) genomes contain …
For example, proteins from organisms with (G+ C)-rich (or (A+ T)-rich) genomes contain …
The triplet code from first principles
EN Trifonov - Journal of Biomolecular structure and dynamics, 2004 - Taylor & Francis
Abstract Temporal order (“chronology”) of appearance of amino acids and their respective
codons on evolutionary scene is reconstructed. A consensus chronology of amino acids is …
codons on evolutionary scene is reconstructed. A consensus chronology of amino acids is …
One scorpion, two venoms: Prevenom of Parabuthus transvaalicus acts as an alternative type of venom with distinct mechanism of action
Scorpion venom is a complex mixture of salts, small molecules, peptides, and proteins.
Scorpions employ this valuable tool in several sophisticated ways for subduing prey …
Scorpions employ this valuable tool in several sophisticated ways for subduing prey …
Moonlighting genes harbor antisense ORFs that encode potential membrane proteins
KE Thomas, PA Gagniuc, E Gagniuc - Scientific Reports, 2023 - nature.com
Moonlighting genes encode for single polypeptide molecules that perform multiple and often
unrelated functions. These genes occur across all domains of life. Their ubiquity and …
unrelated functions. These genes occur across all domains of life. Their ubiquity and …
Reused Protein Segments Linked to Functional Dynamics
Protein space is characterized by extensive recurrence, or “reuse,” of parts, suggesting that
new proteins and domains can evolve by mixing-and-matching of existing segments. From …
new proteins and domains can evolve by mixing-and-matching of existing segments. From …
Functional analysis of Rossmann-like domains reveals convergent evolution of topology and reaction pathways
Rossmann folds are ancient, frequently diverged domains found in many biological reaction
pathways where they have adapted for different functions. Consequently, discernment and …
pathways where they have adapted for different functions. Consequently, discernment and …
The onset and early evolution of life
MJ Russell, AJ Hall - 2006 - pubs.geoscienceworld.org
The tension between CO 2 dissolved at relatively high atmospheric pressure in the Hadean
ocean, and H 2 generated as ocean water oxidized ferrous iron during convection in the …
ocean, and H 2 generated as ocean water oxidized ferrous iron during convection in the …
[HTML][HTML] Living in trinity of extremes: genomic and proteomic signatures of halophilic, thermophilic, and pH adaptation
Since nucleic acids and proteins of unicellular prokaryotes are directly exposed to extreme
environmental conditions, it is possible to explore the genomic-proteomic compositional …
environmental conditions, it is possible to explore the genomic-proteomic compositional …