Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently

A Currin, N Swainston, PJ Day, DB Kell - Chemical Society Reviews, 2015 - pubs.rsc.org
The amino acid sequence of a protein affects both its structure and its function. Thus, the
ability to modify the sequence, and hence the structure and activity, of individual proteins in …

Rational engineering of enzyme stability

VGH Eijsink, A Bjørk, S Gåseidnes, R Sirevåg… - Journal of …, 2004 - Elsevier
During the past 15 years there has been a continuous flow of reports describing proteins
stabilized by the introduction of mutations. These reports span a period from pioneering …

Two strategies to engineer flexible loops for improved enzyme thermostability

H Yu, Y Yan, C Zhang, PA Dalby - Scientific reports, 2017 - nature.com
Flexible sites are potential targets for engineering the stability of enzymes. Nevertheless, the
success rate of the rigidifying flexible sites (RFS) strategy is still low due to a limited …

Directed evolution of enzyme stability

VGH Eijsink, S Gåseidnes, TV Borchert… - Biomolecular …, 2005 - Elsevier
Modern enzyme development relies to an increasing extent on strategies based on diversity
generation followed by screening for variants with optimised properties. In principle, these …

The universality of enzymatic rate–temperature dependency

M Elias, G Wieczorek, S Rosenne, DS Tawfik - Trends in Biochemical …, 2014 - cell.com
Organismal adaptation to extreme temperatures yields enzymes with distinct configurational
stabilities, including thermophilic and psychrophilic enzymes, which are adapted to high and …

Adaptation of enzymes to temperature: searching for basic “strategies”

GN Somero - Comparative Biochemistry and Physiology Part B …, 2004 - Elsevier
The pervasive influence of temperature on biological systems necessitates a suite of
temperature—compensatory adaptations that span all levels of biological organization …

Engineering of flexible loops in enzymes

BM Nestl, B Hauer - Acs Catalysis, 2014 - ACS Publications
From a chemical point of view, enzymes are by far the most structurally complex and
functionally sophisticated molecules known. This is perhaps not surprising, once one …

Protein thermostability engineering

HP Modarres, MR Mofrad, A Sanati-Nezhad - RSC advances, 2016 - pubs.rsc.org
The use of enzymes for industrial and biomedical applications is limited to their function at
elevated temperatures. The principles of thermostability engineering need to be …

Laboratory-directed protein evolution

L Yuan, I Kurek, J English… - … and Molecular Biology …, 2005 - journals.asm.org
Systematic approaches to directed evolution of proteins have been documented since the
1970s. The ability to recruit new protein functions arises from the considerable substrate …

ATP can efficiently stabilize protein through a unique mechanism

X Ou, Y Lao, J Xu, Y Wutthinitikornkit, R Shi, X Chen… - JACS Au, 2021 - ACS Publications
Recent experiments suggested that ATP can effectively stabilize protein structure and inhibit
protein aggregation when its concentration is less than 10 mM, which is significantly lower …