A microbial sea of possibilities: current knowledge and prospects for an improved understanding of the fish microbiome

TPRA Legrand, JW Wynne, LS Weyrich… - Reviews in …, 2020‏ - Wiley Online Library
The mucosal surfaces of fish represent an important barrier that supports and regulates a
diverse array of microbial assemblages and contributes to the overall health and fitness of …

Metatranscriptomics for the human microbiome and microbial community functional profiling

Y Zhang, KN Thompson, T Branck, Y Yan… - Annual Review of …, 2021‏ - annualreviews.org
Shotgun metatranscriptomics (MTX) is an increasingly practical way to survey microbial
community gene function and regulation at scale. This review begins by summarizing the …

The gills of reef fish support a distinct microbiome influenced by host-specific factors

ZA Pratte, M Besson, RD Hollman… - Applied and …, 2018‏ - journals.asm.org
Teleost fish represent the most diverse of the vertebrate groups and play important roles in
food webs, as ecosystem engineers, and as vectors for microorganisms. However, the …

The functional roles of surgeonfishes on coral reefs: past, present and future

SB Tebbett, AC Siqueira, DR Bellwood - Reviews in Fish Biology and …, 2022‏ - Springer
Surgeonfishes have had a long evolutionary history that has been closely linked with coral
reef ecosystems. Today they are a key component of reef fish assemblages, playing a …

Host-associated microbiomes drive structure and function of marine ecosystems

LGE Wilkins, M Leray, A O'Dea, B Yuen… - PLoS …, 2019‏ - journals.plos.org
The significance of symbioses between eukaryotic hosts and microbes extends from the
organismal to the ecosystem level and underpins the health of Earth's most threatened …

Lists of names of prokaryotic Candidatus taxa

A Oren, GM Garrity, CT Parker, M Chuvochina… - 2020‏ - microbiologyresearch.org
We here present annotated lists of names of Candidatus taxa of prokaryotes with ranks
between subspecies and class, proposed between the mid-1990s, when the provisional …

Microbial circadian clocks: host-microbe interplay in diel cycles

EM Wollmuth, ER Angert - BMC microbiology, 2023‏ - Springer
Background Circadian rhythms, observed across all domains of life, enable organisms to
anticipate and prepare for diel changes in environmental conditions. In bacteria, a circadian …

[HTML][HTML] Diverse events have transferred genes for edible seaweed digestion from marine to human gut bacteria

NA Pudlo, GV Pereira, J Parnami, M Cid, S Markert… - Cell Host & Microbe, 2022‏ - cell.com
Humans harbor numerous species of colonic bacteria that digest fiber polysaccharides in
commonly consumed terrestrial plants. More recently in history, regional populations have …

Distinct microbiota composition and fermentation products indicate functional compartmentalization in the hindgut of a marine herbivorous fish

B Pardesi, AM Roberton, KC Lee, ER Angert… - Molecular …, 2022‏ - Wiley Online Library
Many marine herbivorous fishes harbour diverse microbial communities in the hindgut that
can play important roles in host health and nutrition. Kyphosus sydneyanus is a temperate …

Recent progress in the understanding of the gut microbiota of marine fishes

W Ou, G Yu, Y Zhang, K Mai - Marine life science & technology, 2021‏ - Springer
As the significance of the gut microbiota has become increasingly realized, a large number
of related studies have emerged. With respect to the gut microbial composition of fish, the …