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Domestic animals as potential reservoirs of zoonotic viral diseases
Zoonoses are diseases and infections naturally transmitted between humans and vertebrate
animals. Over the years, zoonoses have become increasingly significant threats to global …
animals. Over the years, zoonoses have become increasingly significant threats to global …
Structure and function of the human skin microbiome
NN Schommer, RL Gallo - Trends in microbiology, 2013 - cell.com
An abundant and diverse collection of bacteria, fungi, and viruses inhabits the human skin.
These microorganisms vary between individuals and between different sites on the skin. The …
These microorganisms vary between individuals and between different sites on the skin. The …
A novel porcine circovirus distantly related to known circoviruses is associated with porcine dermatitis and nephropathy syndrome and reproductive failure
Porcine circovirus-associated disease (PCVAD) is clinically manifested by postweaning
multisystemic wasting syndrome (PMWS), respiratory and enteric disease, reproductive …
multisystemic wasting syndrome (PMWS), respiratory and enteric disease, reproductive …
A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples
Unbiased next-generation sequencing (NGS) approaches enable comprehensive pathogen
detection in the clinical microbiology laboratory and have numerous applications for public …
detection in the clinical microbiology laboratory and have numerous applications for public …
Metagenomics and future perspectives in virus discovery
Monitoring the emergence and re-emergence of viral diseases with the goal of containing
the spread of viral agents requires both adequate preparedness and quick response …
the spread of viral agents requires both adequate preparedness and quick response …
A primer on metagenomics
Metagenomics is a discipline that enables the genomic study of uncultured microorganisms.
Faster, cheaper sequencing technologies and the ability to sequence uncultured microbes …
Faster, cheaper sequencing technologies and the ability to sequence uncultured microbes …
Human skin microbiota: high diversity of DNA viruses identified on the human skin by high throughput sequencing
V Foulongne, V Sauvage, C Hebert, O Dereure… - PloS one, 2012 - journals.plos.org
The human skin is a complex ecosystem that hosts a heterogeneous flora. Until recently, the
diversity of the cutaneous microbiota was mainly investigated for bacteria through culture …
diversity of the cutaneous microbiota was mainly investigated for bacteria through culture …
Expanding the RNA virosphere by unbiased metagenomics
YZ Zhang, YM Chen, W Wang, XC Qin… - Annual Review of …, 2019 - annualreviews.org
Although viruses comprise the most abundant genetic material in the biosphere, to date only
several thousand virus species have been formally defined. Such a limited perspective on …
several thousand virus species have been formally defined. Such a limited perspective on …
Metagenomics for pathogen detection in public health
Traditional pathogen detection methods in public health infectious disease surveillance rely
upon the identification of agents that are already known to be associated with a particular …
upon the identification of agents that are already known to be associated with a particular …
Seeker: alignment-free identification of bacteriophage genomes by deep learning
Recent advances in metagenomic sequencing have enabled discovery of diverse, distinct
microbes and viruses. Bacteriophages, the most abundant biological entity on Earth, evolve …
microbes and viruses. Bacteriophages, the most abundant biological entity on Earth, evolve …