The complete sequence and comparative analysis of ape sex chromosomes

KD Makova, BD Pickett, RS Harris, GA Hartley… - Nature, 2024 - nature.com
Apes possess two sex chromosomes—the male-specific Y chromosome and the X
chromosome, which is present in both males and females. The Y chromosome is crucial for …

[HTML][HTML] Structural variation in humans and our primate kin in the era of telomere-to-telomere genomes and pangenomics

JL Rocha, RN Lou, PH Sudmant - Current opinion in genetics & …, 2024 - Elsevier
Highlights•T2T genomes are transforming our understanding of genome architecture and
evolution.•Population scale long read sequencing is identifying novel selective …

Evolutionary divergence between homologous X–Y chromosome genes shapes sex-biased biology

AR DeCasien, K Tsai, S Liu, A Thomas… - Nature Ecology & …, 2025 - nature.com
Sex chromosomes are a fundamental aspect of sex-biased biology, but the extent to which
homologous X–Y gene pairs ('the gametologs') contribute to sex-biased phenotypes …

Comparative genomics illuminates karyotype and sex chromosome evolution of sharks

J Wu, F Liu, J Jiao, H Luo, S Fan, J Liu, H Wang, N Cui… - Cell Genomics, 2024 - cell.com
Chondrichthyes is an important lineage to reconstruct the evolutionary history of vertebrates.
Here, we analyzed genome synteny for six chondrichthyan chromosome-level genomes …

Assessing the recovery of Y chromosome microsatellites with population genomic data using Papio and Theropithecus genomes

G Mutti, G Oteo-Garcia, M Caldon, MJF da Silva… - Scientific Reports, 2023 - nature.com
Y chromosome markers can shed light on male-specific population dynamics but for many
species no such markers have been discovered and are available yet, despite the potential …

Paternal genomic resources from the YanHuang cohort suggested a Weakly-Differentiated Multi-source Admixture model for the formation of Han's founding ancestral …

Z Wang, M Wang, K Liu, H Yuan, S Duan, Y Liu, L Luo… - bioRxiv, 2023 - biorxiv.org
The large-scale human genome revolution and rapidly advanced statistical innovation have
updated our understanding of the fine-scale and complex genetic structure, the entire …

Y chromosome introgression between deeply divergent primate species

A Jensen, ER Horton, J Amboko, SA Parke… - Nature …, 2024 - nature.com
Hybridization and introgression are widespread in nature, with important implications for
adaptation and speciation. Since heterogametic hybrids often have lower fitness than …

Origin and evolutionary trajectories of brown algal sex chromosomes

J Barrera-Redondo, AP Lipinska, P Liu, E Dinatale… - bioRxiv, 2024 - biorxiv.org
Sex chromosomes fall into three classes: XX/XY, ZW/ZZ and U/V systems. The rise, evolution
and demise of U/V systems have remained enigmatic to date. Here, we analyze genomes …

Haplotype-phased genome assemblies and annotation of the northern white-cheeked gibbon (Nomascus leucogenys)

Z Luo, L Jiang, J Xu, J Wang, W Nie, Z Ning, F Yang - Scientific Data, 2024 - nature.com
Nomascus leucogenys is a critically endangered species of small apes. Here, we
sequenced and assembled the male genome of N. leucogenys, using PacBio and Hi-C …

[HTML][HTML] Harvesting the fruits of the first stage of the Primate Genome Project

YT Guo, Y Shao, X Bi, BL Zhang, H Wu, Y Zhou… - Zoological …, 2023 - ncbi.nlm.nih.gov
Primates are highly successful mammals with significant morphological, behavioral, and
physiological diversity. Studying the genomes of non-human primates, as the closest relative …