Pathology and pathobiology of pulmonary hypertension: current insights and future directions
In recent years, major advances have been made in the understanding of the cellular and
molecular mechanisms driving pulmonary vascular remodelling in various forms of …
molecular mechanisms driving pulmonary vascular remodelling in various forms of …
Decoding enhancer complexity with machine learning and high-throughput discovery
GD Smith, WH Ching, P Cornejo-Páramo, ES Wong - Genome biology, 2023 - Springer
Enhancers are genomic DNA elements controlling spatiotemporal gene expression. Their
flexible organization and functional redundancies make deciphering their sequence-function …
flexible organization and functional redundancies make deciphering their sequence-function …
Spatially organized cellular communities form the develo** human heart
The heart, which is the first organ to develop, is highly dependent on its form to function,.
However, how diverse cardiac cell types spatially coordinate to create the complex …
However, how diverse cardiac cell types spatially coordinate to create the complex …
Current genomic deep learning models display decreased performance in cell type-specific accessible regions
Background A number of deep learning models have been developed to predict epigenetic
features such as chromatin accessibility from DNA sequence. Model evaluations commonly …
features such as chromatin accessibility from DNA sequence. Model evaluations commonly …
Chromatin accessibility: biological functions, molecular mechanisms and therapeutic application
Y Chen, R Liang, Y Li, L Jiang, D Ma, Q Luo… - Signal Transduction and …, 2024 - nature.com
The dynamic regulation of chromatin accessibility is one of the prominent characteristics of
eukaryotic genome. The inaccessible regions are mainly located in heterochromatin, which …
eukaryotic genome. The inaccessible regions are mainly located in heterochromatin, which …
Single-cell chromatin accessibility reveals malignant regulatory programs in primary human cancers
To identify cancer-associated gene regulatory changes, we generated single-cell chromatin
accessibility landscapes across eight tumor types as part of The Cancer Genome Atlas …
accessibility landscapes across eight tumor types as part of The Cancer Genome Atlas …
[HTML][HTML] Long noncoding RNAs in cardiovascular disease
A Kohlmaier, LM Holdt, D Teupser - Current opinion in cardiology, 2023 - journals.lww.com
Summary lncRNA research is passing the stage of enumerating lncRNAs or recording
simplified on-off expression switches. Mechanistic analyses are starting to reveal …
simplified on-off expression switches. Mechanistic analyses are starting to reveal …
CRISPRi/a screens in human iPSC-cardiomyocytes identify glycolytic activation as a druggable target for doxorubicin-induced cardiotoxicity
Doxorubicin is limited in its therapeutic utility due to its life-threatening cardiovascular side
effects. Here, we present an integrated drug discovery pipeline combining human induced …
effects. Here, we present an integrated drug discovery pipeline combining human induced …
Stepwise generation of human induced pluripotent stem cell–derived cardiac pericytes to model coronary microvascular dysfunction
Cardiac pericytes (CPs), a major mural cell type maintaining homeostasis, integrity, and
perfusion of the coronary microvasculature, remain the most enigmatic and …
perfusion of the coronary microvasculature, remain the most enigmatic and …
Single-cell multi-modal integrative analyses highlight functional dynamic gene regulatory networks directing human cardiac development
Illuminating the precise stepwise genetic programs directing cardiac development provides
insights into the mechanisms of congenital heart disease and strategies for cardiac …
insights into the mechanisms of congenital heart disease and strategies for cardiac …