Deciphering the genetic architecture of fruit color in strawberry

B Denoyes, A Prohaska, J Petit… - Journal of Experimental …, 2023‏ - academic.oup.com
Fruits of Fragaria species usually have an appealing bright red color due to the
accumulation of anthocyanins, water-soluble flavonoid pigments. Octoploid cultivated …

A roadmap for research in octoploid strawberry

VM Whitaker, SJ Knapp, MA Hardigan… - Horticulture …, 2020‏ - academic.oup.com
The cultivated strawberry (Fragaria× ananassa) is an allo-octoploid species, originating
nearly 300 years ago from wild progenitors from the Americas. Since that time the strawberry …

SubPhaser: a robust allopolyploid subgenome phasing method based on subgenome‐specific k‐mers

KH Jia, ZX Wang, L Wang, GY Li, W Zhang… - New …, 2022‏ - Wiley Online Library
With advanced sequencing technology, dozens of complex polyploid plant genomes have
been characterized. However, for many polyploid species, their diploid ancestors are …

Allelic Variation of MYB10 Is the Major Force Controlling Natural Variation in Skin and Flesh Color in Strawberry (Fragaria spp.) Fruit

C Castillejo, V Waurich, H Wagner, R Ramos… - The Plant …, 2020‏ - academic.oup.com
The fruits of diploid and octoploid strawberry (Fragaria spp) show substantial natural
variation in color due to distinct anthocyanin accumulation and distribution patterns …

The telomere-to-telomere genome of Fragaria vesca reveals the genomic evolution of Fragaria and the origin of cultivated octoploid strawberry

Y Zhou, J **ong, Z Shu, C Dong, T Gu, P Sun… - Horticulture …, 2023‏ - academic.oup.com
Fragaria vesca, commonly known as wild or woodland strawberry, is the most widely
distributed diploid Fragaria species and is native to Europe and Asia. Because of its small …

Transposon signatures of allopolyploid genome evolution

AM Session, DS Rokhsar - Nature Communications, 2023‏ - nature.com
Hybridization brings together chromosome sets from two or more distinct progenitor species.
Genome duplication associated with hybridization, or allopolyploidy, allows these …

Dynamics of accessible chromatin regions and subgenome dominance in octoploid strawberry

C Fang, N Jiang, SJ Teresi, AE Platts, G Agarwal… - Nature …, 2024‏ - nature.com
Subgenome dominance has been reported in diverse allopolyploid species, where genes
from one subgenome are preferentially retained and are more highly expressed than those …

High-quality haplotype-resolved genome assembly of cultivated octoploid strawberry

J Mao, Y Wang, B Wang, J Li, C Zhang… - Horticulture …, 2023‏ - academic.oup.com
Cultivated strawberry (Fragaria× ananassa), a perennial herb belonging to the family
Rosaceae, is a complex octoploid with high heterozygosity at most loci. However, there is no …

Haplotype-resolved genomes of wild octoploid progenitors illuminate genomic diversifications from wild relatives to cultivated strawberry

X **, H Du, C Zhu, H Wan, F Liu, J Ruan, JP Mower… - Nature Plants, 2023‏ - nature.com
Strawberry is an emerging model for studying polyploid genome evolution and rapid
domestication of fruit crops. Here we report haplotype-resolved genomes of two wild …

Unraveling the complex hybrid ancestry and domestication history of cultivated strawberry

MA Hardigan, A Lorant, DDA Pincot… - Molecular biology …, 2021‏ - academic.oup.com
Cultivated strawberry (Fragaria× ananassa) is one of our youngest domesticates, originating
in early eighteenth-century Europe from spontaneous hybrids between wild allo-octoploid …