Turnitin
降AI改写
早检测系统
早降重系统
Turnitin-UK版
万方检测-期刊版
维普编辑部版
Grammarly检测
Paperpass检测
checkpass检测
PaperYY检测
Stochasticity, determinism, and contingency shape genome evolution of endosymbiotic bacteria
BM Boyd, I James, KP Johnson, RB Weiss… - Nature …, 2024 - nature.com
Evolution results from the interaction of stochastic and deterministic processes that create a
web of historical contingency, sha** gene content and organismal function. To understand …
web of historical contingency, sha** gene content and organismal function. To understand …
Putting the genome in insect phylogenomics
KP Johnson - Current opinion in insect science, 2019 - Elsevier
Highlights•Next-generation sequencing has greatly increased the size of phylogenetic
datasets.•Genome reduction approaches are economical, but have limitations.•Full genome …
datasets.•Genome reduction approaches are economical, but have limitations.•Full genome …
Beyond DNA barcoding: The unrealized potential of genome skim data in sample identification
Genetic tools are increasingly used to identify and discriminate between species. One key
transition in this process was the recognition of the potential of the ca 658bp fragment of the …
transition in this process was the recognition of the potential of the ca 658bp fragment of the …
APPLES: scalable distance-based phylogenetic placement with or without alignments
Placing a new species on an existing phylogeny has increasing relevance to several
applications. Placement can be used to update phylogenies in a scalable fashion and can …
applications. Placement can be used to update phylogenies in a scalable fashion and can …
Long-distance dispersal of pigeons and doves generated new ecological opportunities for host-switching and adaptive radiation by their parasites
Adaptive radiation is an important mechanism of organismal diversification and can be
triggered by new ecological opportunities. Although poorly studied in this regard, parasites …
triggered by new ecological opportunities. Although poorly studied in this regard, parasites …
AD Sweet, KP Johnson - Molecular ecology, 2018 - Wiley Online Library
Parasite dispersal can shape host–parasite interactions at both deep and shallow
timescales. One approach to understanding the effects of dispersal is to study parasite …
timescales. One approach to understanding the effects of dispersal is to study parasite …
Quantifying the uncertainty of assembly-free genome-wide distance estimates and phylogenetic relationships using subsampling
Computing distance between two genomes without alignments or even access to
assemblies has many downstream analyses. However, alignment-free methods, including in …
assemblies has many downstream analyses. However, alignment-free methods, including in …
Integrating phylogenomic and population genomic patterns in avian lice provides a more complete picture of parasite evolution
Parasite diversity accounts for most of the biodiversity on earth, and is shaped by many
processes (eg, cospeciation, host switching). To identify the effects of the processes that …
processes (eg, cospeciation, host switching). To identify the effects of the processes that …
Host body size, not host population size, predicts genome-wide effective population size of parasites
J Doña, KP Johnson - Evolution Letters, 2023 - academic.oup.com
The effective population size (N e) of an organism is expected to be generally proportional to
the total number of individuals in a population. In parasites, we might expect the effective …
the total number of individuals in a population. In parasites, we might expect the effective …