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Predicting evolution
M Lässig, V Mustonen, AM Walczak - Nature ecology & evolution, 2017 - nature.com
The face of evolutionary biology is changing: from reconstructing and analysing the past to
predicting future evolutionary processes. Recent developments include prediction of …
predicting future evolutionary processes. Recent developments include prediction of …
Experimental design, population dynamics, and diversity in microbial experimental evolution
In experimental evolution, laboratory-controlled conditions select for the adaptation of
species, which can be monitored in real time. Despite the current popularity of such …
species, which can be monitored in real time. Despite the current popularity of such …
Clinically relevant mutations in core metabolic genes confer antibiotic resistance
Although metabolism plays an active role in antibiotic lethality, antibiotic resistance is
generally associated with drug target modification, enzymatic inactivation, and/or transport …
generally associated with drug target modification, enzymatic inactivation, and/or transport …
Scalable, continuous evolution of genes at mutation rates above genomic error thresholds
A Ravikumar, GA Arzumanyan, MKA Obadi… - Cell, 2018 - cell.com
Directed evolution is a powerful approach for engineering biomolecules and understanding
adaptation. However, experimental strategies for directed evolution are notoriously labor …
adaptation. However, experimental strategies for directed evolution are notoriously labor …
Quantitative evolutionary dynamics using high-resolution lineage tracking
Evolution of large asexual cell populations underlies∼ 30% of deaths worldwide, including
those caused by bacteria, fungi, parasites, and cancer. However, the dynamics underlying …
those caused by bacteria, fungi, parasites, and cancer. However, the dynamics underlying …
Sex speeds adaptation by altering the dynamics of molecular evolution
Sex and recombination are pervasive throughout nature despite their substantial costs.
Understanding the evolutionary forces that maintain these phenomena is a central …
Understanding the evolutionary forces that maintain these phenomena is a central …
Pervasive genetic hitchhiking and clonal interference in forty evolving yeast populations
The dynamics of adaptation determine which mutations fix in a population, and hence how
reproducible evolution will be. This is central to understanding the spectra of mutations …
reproducible evolution will be. This is central to understanding the spectra of mutations …
Global epistasis makes adaptation predictable despite sequence-level stochasticity
Epistatic interactions between mutations can make evolutionary trajectories contingent on
the chance occurrence of initial mutations. We used experimental evolution in …
the chance occurrence of initial mutations. We used experimental evolution in …
Genomic signatures of selection at linked sites: unifying the disparity among species
AD Cutter, BA Payseur - Nature Reviews Genetics, 2013 - nature.com
Population genetics theory supplies powerful predictions about how natural selection
interacts with genetic linkage to sculpt the genomic landscape of nucleotide polymorphism …
interacts with genetic linkage to sculpt the genomic landscape of nucleotide polymorphism …
Population size and the rate of evolution
Does evolution proceed faster in larger or smaller populations? The relationship between
effective population size (N e) and the rate of evolution has consequences for our ability to …
effective population size (N e) and the rate of evolution has consequences for our ability to …