Quantum mechanical methods for enzyme kinetics

J Gao, DG Truhlar - Annual Review of Physical Chemistry, 2002 - annualreviews.org
▪ Abstract This review discusses methods for the incorporation of quantum mechanical
effects into enzyme kinetics simulations in which the enzyme is an explicit part of the model …

Current status of the MB-pol data-driven many-body potential for predictive simulations of water across different phases

E Palos, EF Bull-Vulpe, X Zhu, H Agnew… - Journal of Chemical …, 2024 - ACS Publications
Develo** a molecular-level understanding of the properties of water is central to
numerous scientific and technological applications. However, accurately modeling water …

Development of a “first-principles” water potential with flexible monomers. III. Liquid phase properties

GR Medders, V Babin, F Paesani - Journal of chemical theory and …, 2014 - ACS Publications
The MB-pol full-dimensional water potential introduced in the first two papers of this series
[J. Chem. Theory Comput. 2013, 9, 5395 and J. Chem. Theory Comput. 2014, 10, 1599] is …

Quantum dynamics and spectroscopy of ab initio liquid water: The interplay of nuclear and electronic quantum effects

O Marsalek, TE Markland - The journal of physical chemistry …, 2017 - ACS Publications
Understanding the reactivity and spectroscopy of aqueous solutions at the atomistic level is
crucial for the elucidation and design of chemical processes. However, the simulation of …

An improved multistate empirical valence bond model for aqueous proton solvation and transport

Y Wu, H Chen, F Wang, F Paesani… - The Journal of Physical …, 2008 - ACS Publications
A new multistate empirical valence bond model (MS-EVB3) is developed for proton solvation
and transport in aqueous solutions. The new model and its quantum version (qMS-EVB3) …

[HTML][HTML] Temperature-dependent vibrational spectra and structure of liquid water from classical and quantum simulations with the MB-pol potential energy function

SK Reddy, DR Moberg, SC Straight… - The Journal of Chemical …, 2017 - pubs.aip.org
The structure of liquid water as a function of temperature is investigated through the
modeling of infrared and Raman spectra along with structural order parameters calculated …

An accurate and simple quantum model for liquid water

F Paesani, W Zhang, DA Case, TE Cheatham… - The Journal of …, 2006 - pubs.aip.org
The path-integral molecular dynamics and centroid molecular dynamics methods have been
applied to investigate the behavior of liquid water at ambient conditions starting from a …

The properties of water: Insights from quantum simulations

F Paesani, GA Voth - The Journal of Physical Chemistry B, 2009 - ACS Publications
The properties of water play a central role in many phenomena of relevance to different
areas of science, including physics, chemistry, biology, geology, and climate research …

Transport and spectroscopy of the hydrated proton: a molecular dynamics study

R Vuilleumier, D Borgis - The Journal of chemical physics, 1999 - pubs.aip.org
The precise molecular nature of the hydrated proton, and its spectroscopic signatures, has
been a subject of heated discussions for many years. 1–3 The proton transport properties …

Path-integral centroid methods in quantum statistical mechanics and dynamics

GA Voth - Adv. Chem. Phys, 1996 - books.google.com
Path-integral centroid methods in quantum statistical mechanics and dynamics Page 149
PATH-INTEGRAL CENTROID METHODS IN QUANTUM STATISTICAL MECHANICS AND …