Genomic targets and features of BarA-UvrY (-SirA) signal transduction systems

TR Zere, CA Vakulskas, Y Leng, A Pannuri, AH Potts… - PLoS …, 2015 - journals.plos.org
The two-component signal transduction system BarA-UvrY of Escherichia coli and its
orthologs globally regulate metabolism, motility, biofilm formation, stress resistance …

[HTML][HTML] Microbial community composition in Brazilian stored diesel fuel of varying sulfur content, using high-throughput sequencing

AO de Azambuja, F Bücker, PD de Quadros… - Fuel, 2017 - Elsevier
The reduction of sulfur content in diesel is a worldwide trend that seeks to minimize the
environmental impact arising from the combustion of this fuel in large cities. However, there …

Contrasting diversity of vaginal lactobacilli among the females of Northeast India

S Das Purkayastha, MK Bhattacharya, HK Prasad… - BMC microbiology, 2019 - Springer
Background Lactobacilli are gatekeepers of vaginal ecosystem impeding growth of
pathogenic microbes and their diversity varies across populations worldwide. The present …

Assessment of soil bacterial communities in integrated crop production systems within the Amazon Biome, Brazil: a comparative study

KB do Carmo, R Dias, PD de Quadros… - Brazilian Journal of …, 2024 - Springer
Integrated production systems have been proposed as alternative to sustainable land use.
However, information regarding bacterial community structure and diversity in soils of …

Competition with insectivorous ants as a contributor to low songbird diversity at low elevations in the eastern Himalaya

K Supriya, TD Price, CS Moreau - Ecology and Evolution, 2020 - Wiley Online Library
Competitive interactions between distantly related clades could cause complementary
diversity patterns of these clades over large spatial scales. One such example might be ants …

Different combinations of atomic interactions predict protein‐small molecule and protein‐DNA/RNA affinities with similar accuracy

R Dias, B Kolazckowski - Proteins: Structure, Function, and …, 2015 - Wiley Online Library
Interactions between proteins and other molecules play essential roles in all biological
processes. Although it is widely held that a protein's ligand specificity is determined primarily …

Porting and Optimizing G-BLASTN to the ROCm-based Supercomputer

Y Zhang, H Qian - 2020 International Conference on Computer …, 2020 - ieeexplore.ieee.org
ROCm, the complete GPGPU ecosystem launched by AMD in 2015, is the first open-source
software development platform for HPC/Hyperscale-class GPU computing and corresponds …

Lablab Purpureus Influences Soil Fertility and Microbial Diversity in a Tropical Maize-Based No-Tillage System

P Dörr de Quadros, A R. Martin, K Zhalnina, R Dias… - Soil Systems, 2019 - mdpi.com
There are multiple mechanisms by which enhanced diversity of plant communities improves
soil structure and function. One critical pathway mediating this relationship is through …

Lablab purpureus influences soil fertility and microbial diversity in a tropical maize-based no-tillage system

P Dörr de Quadros, AR Martin, K Zhalnina, R Dias… - 2019 - utoronto.scholaris.ca
There are multiple mechanisms by which enhanced diversity of plant communities improves
soil structure and function. One critical pathway mediating this relationship is through …

Integrating Computational, Statistical and Biochemical Approaches to Characterize the Molecular-Functional Evolution of Proteins

R Dias - 2016 - search.proquest.com
The observable protein functional diversity has been generated through an extensive
evolutionary process. Sophisticated phylogenetic analyses are allowing researchers to peer …