Use of metatranscriptomics in microbiome research
S Bashiardes… - … and biology insights, 2016 - journals.sagepub.com
The human intestinal microbiome is a microbial ecosystem that expresses as many as 100
times more genes than the human host, thereby constituting an important component of the …
times more genes than the human host, thereby constituting an important component of the …
Small RNAs in bacteria and archaea: who they are, what they do, and how they do it
Small RNAs are ubiquitously present regulators in all kingdoms of life. Most bacterial and
archaeal small RNAs (sRNAs) act by antisense mechanisms on multiple target mRNAs …
archaeal small RNAs (sRNAs) act by antisense mechanisms on multiple target mRNAs …
The battle for iron between bacterial pathogens and their vertebrate hosts
EP Skaar - PLoS pathogens, 2010 - journals.plos.org
Iron is a vital nutrient for virtually all forms of life. The requirement for iron is based on its role
in cellular processes ranging from energy generation and DNA replication to oxygen …
in cellular processes ranging from energy generation and DNA replication to oxygen …
Bacterial small RNA regulators: versatile roles and rapidly evolving variations
S Gottesman, G Storz - Cold Spring Harbor perspectives …, 2011 - cshperspectives.cshlp.org
Small RNA regulators (sRNAs) have been identified in a wide range of bacteria and found to
play critical regulatory roles in many processes. The major families of sRNAs include true …
play critical regulatory roles in many processes. The major families of sRNAs include true …
[HTML][HTML] Regulatory RNAs in bacteria
LS Waters, G Storz - Cell, 2009 - cell.com
Bacteria possess numerous and diverse means of gene regulation using RNA molecules,
including mRNA leaders that affect expression in cis, small RNAs that bind to proteins or …
including mRNA leaders that affect expression in cis, small RNAs that bind to proteins or …
Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity
R Sorek, P Cossart - Nature Reviews Genetics, 2010 - nature.com
Transcriptome-wide studies in eukaryotes have been instrumental in the characterization of
fundamental regulatory mechanisms for more than a decade. By contrast, in prokaryotes …
fundamental regulatory mechanisms for more than a decade. By contrast, in prokaryotes …
Bacterial antisense RNAs: how many are there, and what are they doing?
Antisense RNAs encoded on the DNA strand opposite another gene have the potential to
form extensive base-pairing interactions with the corresponding sense RNA. Unlike other …
form extensive base-pairing interactions with the corresponding sense RNA. Unlike other …
Elemental economy: microbial strategies for optimizing growth in the face of nutrient limitation
SS Merchant, JD Helmann - Advances in microbial physiology, 2012 - Elsevier
Microorganisms play a dominant role in the biogeochemical cycling of nutrients. They are
rightly praised for their facility for fixing both carbon and nitrogen into organic matter, and …
rightly praised for their facility for fixing both carbon and nitrogen into organic matter, and …
Mechanism of RNA silencing by Hfq-binding small RNAs
H Aiba - Current opinion in microbiology, 2007 - Elsevier
The stress-induced small RNAs SgrS and RyhB in Escherichia coli form a specific
ribonucleoprotein complex with RNAse E and Hfq resulting in translation inhibition, RNAse …
ribonucleoprotein complex with RNAse E and Hfq resulting in translation inhibition, RNAse …
A single-base resolution map of an archaeal transcriptome
O Wurtzel, R Sapra, F Chen, Y Zhu… - Genome …, 2010 - genome.cshlp.org
Organisms of the third domain of life, the Archaea, share molecular characteristics both with
Bacteria and Eukarya. These organisms attract scientific attention as research models for …
Bacteria and Eukarya. These organisms attract scientific attention as research models for …