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Fishing for fish environmental DNA: Ecological applications, methodological considerations, surveying designs, and ways forward
Vast global declines of freshwater and marine fish diversity and population abundance pose
serious threats to both ecosystem sustainability and human livelihoods. Environmental DNA …
serious threats to both ecosystem sustainability and human livelihoods. Environmental DNA …
The expanding role of DNA barcodes: Indispensable tools for ecology, evolution, and conservation
DNA barcoding has transformed the fields of ecology, evolution, and conservation by
providing a rapid and effective tool for species identification. The growth of DNA barcodes as …
providing a rapid and effective tool for species identification. The growth of DNA barcodes as …
DNA barcoding of Cymbidium by genome skimming: Call for next‐generation nuclear barcodes
L Zhang, YW Huang, JL Huang, JD Ya… - Molecular Ecology …, 2023 - Wiley Online Library
Cymbidium is an orchid genus that has undergone rapid radiation and has high ornamental,
economic, ecological and cultural importance, but its classification based on morphology is …
economic, ecological and cultural importance, but its classification based on morphology is …
Skimming genomes for systematics and DNA barcodes of corals
Numerous genomic methods developed over the past two decades have enabled the
discovery and extraction of orthologous loci to help resolve phylogenetic relationships …
discovery and extraction of orthologous loci to help resolve phylogenetic relationships …
DNA barcoding of fungal specimens using PacBio long‐read high‐throughput sequencing
Molecular methods are increasingly used to identify species that lack conspicuous macro‐or
micromorphological characters. Taxonomic and ecological research teams barcode large …
micromorphological characters. Taxonomic and ecological research teams barcode large …
Fast and accurate distance‐based phylogenetic placement using divide and conquer
Phylogenetic placement of query samples on an existing phylogeny is increasingly used in
molecular ecology, including sample identification and microbiome environmental sampling …
molecular ecology, including sample identification and microbiome environmental sampling …
Using DNA metabarcoding to identify floral visitation by pollinators
The identification of floral visitation by pollinators provides an opportunity to improve our
understanding of the fine-scale ecological interactions between plants and pollinators …
understanding of the fine-scale ecological interactions between plants and pollinators …
The MetaInvert soil invertebrate genome resource provides insights into below-ground biodiversity and evolution
Soil invertebrates are among the least understood metazoans on Earth. Thus far, the lack of
taxonomically broad and dense genomic resources has made it hard to thoroughly …
taxonomically broad and dense genomic resources has made it hard to thoroughly …
Target capture and genome skimming for plant diversity studies
Recent technological advances in long‐read high‐throughput sequencing and assembly
methods have facilitated the generation of annotated chromosome‐scale whole‐genome …
methods have facilitated the generation of annotated chromosome‐scale whole‐genome …
Optimizing a metabarcoding marker portfolio for species detection from complex mixtures of globally diverse fishes
DNA metabarcoding is used to enumerate and identify taxa in both environmental samples
and tissue mixtures, but the effectiveness of particular markers depends on their sensitivity to …
and tissue mixtures, but the effectiveness of particular markers depends on their sensitivity to …