[HTML][HTML] Human housekee** genes, revisited

E Eisenberg, EY Levanon - TRENDS in Genetics, 2013 - cell.com
Housekee** genes are involved in basic cell maintenance and, therefore, are expected to
maintain constant expression levels in all cells and conditions. Identification of these genes …

Regulation of eukaryotic gene expression by the untranslated gene regions and other non-coding elements

LW Barrett, S Fletcher, SD Wilton - Cellular and molecular life sciences, 2012 - Springer
There is now compelling evidence that the complexity of higher organisms correlates with
the relative amount of non-coding RNA rather than the number of protein-coding genes …

[HTML][HTML] A genome-wide framework for map** gene regulation via cellular genetic screens

M Gasperini, AJ Hill, JL McFaline-Figueroa, B Martin… - Cell, 2019 - cell.com
Over one million candidate regulatory elements have been identified across the human
genome, but nearly all are unvalidated and their target genes uncertain. Approaches based …

Characterization of ceramide synthase 2: tissue distribution, substrate specificity, and inhibition by sphingosine 1-phosphate

EL Laviad, L Albee, I Pankova-Kholmyansky… - Journal of Biological …, 2008 - jbc.org
Ceramide is an important lipid signaling molecule and a key intermediate in sphingolipid
biosynthesis. Recent studies have implied a previously unappreciated role for the ceramide …

Alu elements contain many binding sites for transcription factors and may play a role in regulation of developmental processes

P Polak, E Domany - BMC genomics, 2006 - Springer
Background The human genome contains over one million Alu repeat elements whose
distribution is not uniform. While metabolism-related genes were shown to be enriched with …

Raising the estimate of functional human sequences

M Pheasant, JS Mattick - Genome research, 2007 - genome.cshlp.org
While less than 1.5% of the mammalian genome encodes proteins, it is now evident that the
vast majority is transcribed, mainly into non-protein-coding RNAs. This raises the question of …

Housekee** and tissue-specific genes in mouse tissues

KE Kouadjo, Y Nishida, JF Cadrin-Girard, M Yoshioka… - BMC genomics, 2007 - Springer
Background This study aims to characterize the housekee** and tissue-specific genes in
15 mouse tissues by using the serial analysis of gene expression (SAGE) strategy which …

Combined analysis of dissimilar promoter accessibility and gene expression profiles identifies tissue-specific genes and actively repressed networks

RR Starks, A Biswas, A Jain, G Tuteja - Epigenetics & chromatin, 2019 - Springer
Background The assay for transposase-accessible chromatin (ATAC-seq) is a powerful
method to examine chromatin accessibility. While many studies have reported a positive …

Transcription initiation patterns indicate divergent strategies for gene regulation at the chromatin level

EA Rach, DR Winter, AM Benjamin, DL Corcoran… - PLoS …, 2011 - journals.plos.org
The application of deep sequencing to map 5′ capped transcripts has confirmed the
existence of at least two distinct promoter classes in metazoans:“focused” promoters with …

How many human genes can be defined as housekee** with current expression data?

J Zhu, F He, S Song, J Wang, J Yu - BMC genomics, 2008 - Springer
Background Housekee** (HK) genes are ubiquitously expressed in all tissue/cell types
and constitute a basal transcriptome for the maintenance of basic cellular functions …