Molecular weaving
Historically, the interlacing of strands at the molecular level has mainly been limited to
coordination polymers and DNA. Despite being proposed on a number of occasions, the …
coordination polymers and DNA. Despite being proposed on a number of occasions, the …
The polymer physics of single DNA confined in nanochannels
In recent years, applications and experimental studies of DNA in nanochannels have
stimulated the investigation of the polymer physics of DNA in confinement. Recent advances …
stimulated the investigation of the polymer physics of DNA in confinement. Recent advances …
Direct observation of DNA knots using a solid-state nanopore
Long DNA molecules can self-entangle into knots. Experimental techniques for observing
such DNA knots (primarily gel electrophoresis) are limited to bulk methods and circular …
such DNA knots (primarily gel electrophoresis) are limited to bulk methods and circular …
Complex DNA knots detected with a nanopore sensor
Equilibrium knots are common in biological polymers—their prevalence, size distribution,
structure, and dynamics have been extensively studied, with implications to fundamental …
structure, and dynamics have been extensively studied, with implications to fundamental …
Activity-driven polymer knotting for macromolecular topology engineering
JX Li, S Wu, LL Hao, QL Lei, YQ Ma - Science Advances, 2024 - science.org
Macromolecules can gain special properties by adopting knotted conformations, but
engineering knotted macromolecules is a challenging task. Here, we unexpectedly find that …
engineering knotted macromolecules is a challenging task. Here, we unexpectedly find that …
Glass formation in ring polymer melts having variable knot complexity and molecular mass
YT Dong, XY Song, X Xu, S Jiang, JF Douglas… - …, 2024 - ACS Publications
The variation of polymer topology provides an alternative way to tune the properties of
polymer materials without varying the chemistry of the monomers composing the polymer …
polymer materials without varying the chemistry of the monomers composing the polymer …
Pore translocation of knotted DNA rings
We use an accurate coarse-grained model for DNA and stochastic molecular dynamics
simulations to study the pore translocation of 10-kbp–long DNA rings that are knotted. By …
simulations to study the pore translocation of 10-kbp–long DNA rings that are knotted. By …
A nanofluidic knot factory based on compression of single DNA in nanochannels
S Amin, A Khorshid, L Zeng, P Zimny… - Nature …, 2018 - nature.com
Knots form when polymers self-entangle, a process enhanced by compaction with important
implications in biological and artificial systems involving chain confinement. In particular …
implications in biological and artificial systems involving chain confinement. In particular …
Motion of knots in DNA stretched by elongational fields
Knots in DNA occur in biological systems, serve as a model system for polymer
entanglement, and affect the efficacy of modern genomics technologies. We study the …
entanglement, and affect the efficacy of modern genomics technologies. We study the …
Diffusion of knots along DNA confined in nanochannels
We study the diffusion of knots along relaxed deoxyribonucleic acid (DNA) in nanochannels
using a nanofluidic “knot factory” device for knot generation. The apparent scaling exponent …
using a nanofluidic “knot factory” device for knot generation. The apparent scaling exponent …