Ubiquitin-like protein conjugation: structures, chemistry, and mechanism

L Cappadocia, CD Lima - Chemical reviews, 2018 - ACS Publications
Ubiquitin-like proteins (Ubl's) are conjugated to target proteins or lipids to regulate their
activity, stability, subcellular localization, or macromolecular interactions. Similar to ubiquitin …

The machinery of macroautophagy

Y Feng, D He, Z Yao, DJ Klionsky - Cell research, 2014 - nature.com
Autophagy is a primarily degradative pathway that takes place in all eukaryotic cells. It is
used for recycling cytoplasm to generate macromolecular building blocks and energy under …

Reconstitution of autophagosome nucleation defines Atg9 vesicles as seeds for membrane formation

J Sawa-Makarska, V Baumann, N Coudevylle… - Science, 2020 - science.org
INTRODUCTION Macroautophagy (hereafter autophagy) is an evolutionarily conserved
lysosomal degradation pathway. It ensures cellular homeostasis and health by removing …

An E1–E2 fusion protein primes antiviral immune signalling in bacteria

HE Ledvina, Q Ye, Y Gu, AE Sullivan, Y Quan, RK Lau… - Nature, 2023 - nature.com
In all organisms, innate immune pathways sense infection and rapidly activate potent
immune responses while avoiding inappropriate activation (autoimmunity). In humans, the …

Mammalian autophagy: how does it work?

CF Bento, M Renna, G Ghislat, C Puri… - Annual review of …, 2016 - annualreviews.org
Autophagy is a conserved intracellular pathway that delivers cytoplasmic contents to
lysosomes for degradation via double-membrane autophagosomes. Autophagy substrates …

Activation and targeting of ATG8 protein lipidation

S Martens, D Fracchiolla - Cell discovery, 2020 - nature.com
ATG8 family proteins are evolutionary conserved ubiquitin-like modifiers, which become
attached to the headgroup of the membrane lipid phosphatidylethanolamine in a process …

Mechanisms of autophagy

NN Noda, F Inagaki - Annual review of biophysics, 2015 - annualreviews.org
The formation of the autophagosome, a landmark event in autophagy, is accomplished by
the concerted actions of Atg proteins. The initial step of starvation-induced autophagy in …

Autophagic processes in yeast: mechanism, machinery and regulation

F Reggiori, DJ Klionsky - Genetics, 2013 - academic.oup.com
Autophagy refers to a group of processes that involve degradation of cytoplasmic
components including cytosol, macromolecular complexes, and organelles, within the …

An overview of macroautophagy in yeast

X Wen, DJ Klionsky - Journal of molecular biology, 2016 - Elsevier
Macroautophagy is an evolutionarily conserved dynamic pathway that functions primarily in
a degradative manner. A basal level of macroautophagy occurs constitutively, but this …

Oxidation of Atg3 and Atg7 mediates inhibition of autophagy

K Frudd, T Burgoyne, JR Burgoyne - Nature communications, 2018 - nature.com
Macroautophagy (autophagy) is a crucial cellular stress response for degrading defective
macromolecules and organelles, as well as providing bioenergetic intermediates during …