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Overview of the Antimicrobial Compounds Produced by Members of the Bacillus subtilis Group
Over the last seven decades, applications using members of the Bacillus subtilis group have
emerged in both food processes and crop protection industries. Their ability to form survival …
emerged in both food processes and crop protection industries. Their ability to form survival …
Protein Data Bank (PDB): the single global macromolecular structure archive
Abstract The Protein Data Bank (PDB)––the single global repository of experimentally
determined 3D structures of biological macromolecules and their complexes––was …
determined 3D structures of biological macromolecules and their complexes––was …
Computational approaches to natural product discovery
Starting with the earliest Streptomyces genome sequences, the promise of natural product
genome mining has been captivating: genomics and bioinformatics would transform …
genome mining has been captivating: genomics and bioinformatics would transform …
antiSMASH 2.0—a versatile platform for genome mining of secondary metabolite producers
Microbial secondary metabolites are a potent source of antibiotics and other
pharmaceuticals. Genome mining of their biosynthetic gene clusters has become a key …
pharmaceuticals. Genome mining of their biosynthetic gene clusters has become a key …
A roadmap for natural product discovery based on large-scale genomics and metabolomics
Actinobacteria encode a wealth of natural product biosynthetic gene clusters, whose
systematic study is complicated by numerous repetitive motifs. By combining several metrics …
systematic study is complicated by numerous repetitive motifs. By combining several metrics …
NRPSpredictor2—a web server for predicting NRPS adenylation domain specificity
The products of many bacterial non-ribosomal peptide synthetases (NRPS) are highly
important secondary metabolites, including vancomycin and other antibiotics. The ability to …
important secondary metabolites, including vancomycin and other antibiotics. The ability to …
Global chemical analysis of biology by mass spectrometry
Mass spectrometry instruments measure the mass to charge ratio of ions, from which we
infer the molecular structures. They are key tools for investigating the incredibly diverse …
infer the molecular structures. They are key tools for investigating the incredibly diverse …
[HTML][HTML] The secondary metabolite bioinformatics portal: computational tools to facilitate synthetic biology of secondary metabolite production
Natural products are among the most important sources of lead molecules for drug
discovery. With the development of affordable whole-genome sequencing technologies and …
discovery. With the development of affordable whole-genome sequencing technologies and …
Nonribosomal peptide synthetases: structures and dynamics
Nonribosomal peptide synthetases (NRPSs) are large multimodular biocatalysts that utilize
complex regiospecific and stereospecific reactions to assemble structurally and functionally …
complex regiospecific and stereospecific reactions to assemble structurally and functionally …
Recent development of antiSMASH and other computational approaches to mine secondary metabolite biosynthetic gene clusters
Many drugs are derived from small molecules produced by microorganisms and plants, so-
called natural products. Natural products have diverse chemical structures, but the …
called natural products. Natural products have diverse chemical structures, but the …