How to fail at species delimitation

BC Carstens, TA Pelletier, NM Reid… - Molecular ecology, 2013 - Wiley Online Library
Species delimitation is the act of identifying species‐level biological diversity. In recent
years, the field has witnessed a dramatic increase in the number of methods available for …

Coalescent-based species delimitation in an integrative taxonomy

MK Fujita, AD Leaché, FT Burbrink, JA McGuire… - Trends in ecology & …, 2012 - cell.com
The statistical rigor of species delimitation has increased dramatically over the past decade.
Coalescent theory provides powerful models for population genetic inference, and is now …

The BPP program for species tree estimation and species delimitation

Z Yang - Current Zoology, 2015 - academic.oup.com
This paper provides an overview and a tutorial of the BPP program, which is a Bayesian
MCMC program for analyzing multi-locus genomic sequence data under the multispecies …

Tectonics, climate and the diversification of the tropical African terrestrial flora and fauna

TLP Couvreur, G Dauby, A Blach‐Overgaard… - Biological …, 2021 - Wiley Online Library
Tropical Africa is home to an astonishing biodiversity occurring in a variety of ecosystems.
Past climatic change and geological events have impacted the evolution and diversification …

Comparison of methods for molecular species delimitation across a range of speciation scenarios

A Luo, C Ling, SYW Ho, CD Zhu - Systematic Biology, 2018 - academic.oup.com
Species are fundamental units in biological research and can be defined on the basis of
various operational criteria. There has been growing use of molecular approaches for …

Unguided species delimitation using DNA sequence data from multiple loci

Z Yang, B Rannala - Molecular Biology and Evolution, 2014 - academic.oup.com
A method was developed for simultaneous Bayesian inference of species delimitation and
species phylogeny using the multispecies coalescent model. The method eliminates the …

Species delimitation using genome-wide SNP data

AD Leaché, MK Fujita, VN Minin… - Systematic …, 2014 - academic.oup.com
The multispecies coalescent has provided important progress for evolutionary inferences,
including increasing the statistical rigor and objectivity of comparisons among competing …

Genomic analysis reveals a cryptic pangolin species

TT Gu, H Wu, F Yang, P Gaubert… - Proceedings of the …, 2023 - National Acad Sciences
Eight extant species of pangolins are currently recognized. Recent studies found that two
mitochondrial haplotypes identified in confiscations in Hong Kong could not be assigned to …

DNA-based species delimitation in algae

F Leliaert, H Verbruggen… - European journal of …, 2014 - Taylor & Francis
Given the problems of species delimitation in algae using morphology or sexual
compatibility, molecular data are becoming the standard for delimiting species and testing …

How to describe a cryptic species? Practical challenges of molecular taxonomy

KM Jörger, M Schrödl - Frontiers in zoology, 2013 - Springer
Background Molecular methods of species delineation are rapidly develo** and widely
considered as fast and efficient means to discover species and face the'taxonomic …