Dynamic control of aptamer–ligand activity using strand displacement reactions

J Lloyd, CH Tran, K Wadhwani… - ACS synthetic …, 2018 - ACS Publications
Nucleic acid aptamers are an expandable toolkit of sensors and regulators. To employ
aptamer regulators within nonequilibrium molecular networks, the aptamer–ligand …

Building an RNA-based toggle switch using inhibitory RNA aptamers

A Climent-Catala, TE Ouldridge, GBV Stan… - ACS synthetic …, 2022 - ACS Publications
Synthetic RNA systems offer unique advantages such as faster response, increased
specificity, and programmability compared to conventional protein-based networks. Here …

Practical differentiation using ultrasensitive molecular circuits

CC Samaniego, G Giordano… - 2019 18th European …, 2019 - ieeexplore.ieee.org
Biological systems compute spatial and temporal gradients with a variety of mechanisms,
some of which have been shown to include integral feedback. In traditional engineering …

A robust molecular network motif for period-doubling devices

C Cuba Samaniego, E Franco - ACS synthetic biology, 2018 - ACS Publications
Life is sustained by a variety of cyclic processes such as cell division, muscle contraction,
and neuron firing. The periodic signals powering these processes often direct a variety of …

Design of a bistable network using the CRISPR/Cas system

CC Samaniego, HKK Subramanian… - 2017 IEEE Conference …, 2017 - ieeexplore.ieee.org
The CRISPR/Cas-based genome editing system has provided a powerful tool for control of
gene activity within cells. Here, we model an experimentally plausible architecture …

Engineering LuxR-type quorum sensing proteins for new functions

NA DeLateur - 2019 - dspace.mit.edu
Bacteria communicate information in a process known as quorum sensing, actuating
downstream gene expression based on cell-cell signalling. Cell-cell signalling allows for …

[PDF][PDF] Design of a biomolecular bistable network using the CRISPR/Cas system

The CRISPR/Cas-based genome editing system has provided a powerful tool for control of
gene activity within cells. Here, we model an experimentally plausible architecture …

[BOOK][B] Design of Robust Feedback Networks From Ultrasensitive Modules

CEC Samaniego - 2017 - search.proquest.com
Synthetic biology promise to provide solutions to many challenges in energy, agriculture,
and health by reprogramming cells to execute new tasks in the host organism. In order to do …

Design of Robust Feedback Networks From Ultrasensitive Modules

CE Cuba Samaniego - 2017 - escholarship.org
Synthetic biology promise to provide solutions to many challenges in energy, agriculture,
and health by reprogramming cells to execute new tasks in the host organism. In order to do …