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Integrating QSAR modelling and deep learning in drug discovery: the emergence of deep QSAR
Quantitative structure–activity relationship (QSAR) modelling, an approach that was
introduced 60 years ago, is widely used in computer-aided drug design. In recent years …
introduced 60 years ago, is widely used in computer-aided drug design. In recent years …
Machine learning in preclinical drug discovery
Drug-discovery and drug-development endeavors are laborious, costly and time consuming.
These programs can take upward of 12 years and cost US $2.5 billion, with a failure rate of …
These programs can take upward of 12 years and cost US $2.5 billion, with a failure rate of …
Prospective de novo drug design with deep interactome learning
De novo drug design aims to generate molecules from scratch that possess specific
chemical and pharmacological properties. We present a computational approach utilizing …
chemical and pharmacological properties. We present a computational approach utilizing …
Invalid SMILES are beneficial rather than detrimental to chemical language models
MA Skinnider - Nature Machine Intelligence, 2024 - nature.com
Generative machine learning models have attracted intense interest for their ability to
sample novel molecules with desired chemical or biological properties. Among these …
sample novel molecules with desired chemical or biological properties. Among these …
Unlocking the potential of generative AI in drug discovery
A Gangwal, A Lavecchia - Drug Discovery Today, 2024 - Elsevier
Highlights•Artificial intelligence (AI) is transforming the drug discovery process by providing
actionable insights from huge amount of data.•Deep-learning models, especially generative …
actionable insights from huge amount of data.•Deep-learning models, especially generative …
Artificial intelligence for natural product drug discovery
Developments in computational omics technologies have provided new means to access
the hidden diversity of natural products, unearthing new potential for drug discovery. In …
the hidden diversity of natural products, unearthing new potential for drug discovery. In …
Language models can learn complex molecular distributions
Deep generative models of molecules have grown immensely in popularity, trained on
relevant datasets, these models are used to search through chemical space. The …
relevant datasets, these models are used to search through chemical space. The …
[HTML][HTML] Chemical language models for de novo drug design: Challenges and opportunities
F Grisoni - Current Opinion in Structural Biology, 2023 - Elsevier
Generative deep learning is accelerating de novo drug design, by allowing the generation of
molecules with desired properties on demand. Chemical language models–which generate …
molecules with desired properties on demand. Chemical language models–which generate …
Chemical language modeling with structured state space sequence models
Generative deep learning is resha** drug design. Chemical language models (CLMs)–
which generate molecules in the form of molecular strings–bear particular promise for this …
which generate molecules in the form of molecular strings–bear particular promise for this …
Evaluation guidelines for machine learning tools in the chemical sciences
Abstract Machine learning (ML) promises to tackle the grand challenges in chemistry and
speed up the generation, improvement and/or ordering of research hypotheses. Despite the …
speed up the generation, improvement and/or ordering of research hypotheses. Despite the …