Two-photon calcium imaging of neuronal activity
In vivo two-photon calcium imaging (2PCI) is a technique used for recording neuronal
activity in the intact brain. It is based on the principle that, when neurons fire action …
activity in the intact brain. It is based on the principle that, when neurons fire action …
Making sense of astrocytic calcium signals—from acquisition to interpretation
Astrocytes functionally interact with neurons and with other brain cells. Although not
electrically excitable, astrocytes display a complex repertoire of intracellular Ca2+ signalling …
electrically excitable, astrocytes display a complex repertoire of intracellular Ca2+ signalling …
Simultaneous denoising, deconvolution, and demixing of calcium imaging data
We present a modular approach for analyzing calcium imaging recordings of large neuronal
ensembles. Our goal is to simultaneously identify the locations of the neurons, demix …
ensembles. Our goal is to simultaneously identify the locations of the neurons, demix …
A suite of transgenic driver and reporter mouse lines with enhanced brain-cell-type targeting and functionality
Modern genetic approaches are powerful in providing access to diverse cell types in the
brain and facilitating the study of their function. Here, we report a large set of driver and …
brain and facilitating the study of their function. Here, we report a large set of driver and …
Time and experience differentially affect distinct aspects of hippocampal representational drift
Hippocampal activity is critical for spatial memory. Within a fixed, familiar environment,
hippocampal codes gradually change over timescales of days to weeks—a phenomenon …
hippocampal codes gradually change over timescales of days to weeks—a phenomenon …
Suite2p: beyond 10,000 neurons with standard two-photon microscopy
The combination of two-photon microscopy recordings and powerful calcium-dependent
fluorescent sensors enables simultaneous recording of unprecedentedly large populations …
fluorescent sensors enables simultaneous recording of unprecedentedly large populations …
CaImAn an open source tool for scalable calcium imaging data analysis
Advances in fluorescence microscopy enable monitoring larger brain areas in-vivo with finer
time resolution. The resulting data rates require reproducible analysis pipelines that are …
time resolution. The resulting data rates require reproducible analysis pipelines that are …
Hippocampal neurogenesis confers stress resilience by inhibiting the ventral dentate gyrus
Adult neurogenesis in the dentate gyrus of the hippocampus is highly regulated by
environmental influences, and functionally implicated in behavioural responses to stress …
environmental influences, and functionally implicated in behavioural responses to stress …
All-optical physiology resolves a synaptic basis for behavioral timescale plasticity
Learning has been associated with modifications of synaptic and circuit properties, but the
precise changes storing information in mammals have remained largely unclear. We …
precise changes storing information in mammals have remained largely unclear. We …
Miniaturized integration of a fluorescence microscope
The light microscope is traditionally an instrument of substantial size and expense. Its
miniaturized integration would enable many new applications based on mass-producible …
miniaturized integration would enable many new applications based on mass-producible …