Metabolic modeling of a mutualistic microbial community

S Stolyar, S Van Dien, KL Hillesland… - Molecular systems …, 2007 - embopress.org
The rate of production of methane in many environments depends upon mutualistic
interactions between sulfate‐reducing bacteria and methanogens. To enhance our …

Flux balance analysis of primary metabolism in Chlamydomonas reinhardtii

NR Boyle, JA Morgan - BMC systems biology, 2009 - Springer
Background Photosynthetic organisms convert atmospheric carbon dioxide into numerous
metabolites along the pathways to make new biomass. Aquatic photosynthetic organisms …

Complete genome sequence of the erythromycin-producing bacterium Saccharopolyspora erythraea NRRL23338

M Oliynyk, M Samborskyy, JB Lester, T Mironenko… - Nature …, 2007 - nature.com
Saccharopolyspora erythraea is used for the industrial-scale production of the antibiotic
erythromycin A, derivatives of which play a vital role in medicine. The sequenced …

Systems biology and biotechnology of Streptomyces species for the production of secondary metabolites

KS Hwang, HU Kim, P Charusanti, BØ Palsson… - Biotechnology …, 2014 - Elsevier
Streptomyces species continue to attract attention as a source of novel medicinal
compounds. Despite a long history of studies on these microorganisms, they still have many …

Genome-scale models of bacterial metabolism: reconstruction and applications

M Durot, PY Bourguignon… - FEMS microbiology …, 2008 - academic.oup.com
Genome-scale metabolic models bridge the gap between genome-derived biochemical
information and metabolic phenotypes in a principled manner, providing a solid …