[HTML][HTML] The develo** infant gut microbiome: a strain-level view

H Enav, F Bäckhed, RE Ley - Cell Host & Microbe, 2022 - cell.com
At birth, neonates provide a vast habitat awaiting microbial colonization. Microbiome
assembly is a complex process involving microbial seeding and succession driven by …

Single-cell approaches in human microbiome research

V Lloréns-Rico, JA Simcock, GRB Huys, J Raes - Cell, 2022 - cell.com
Microbial culturing and meta-omic profiling technologies have significantly advanced our
understanding of the taxonomic and functional variation of the human microbiome and its …

Exploring the gut microbiota: lifestyle choices, disease associations, and personal genomics

S Pedroza Matute, S Iyavoo - Frontiers in Nutrition, 2023 - frontiersin.org
The gut microbiota is a rich and dynamic ecosystem that actively interacts with the human
body, playing a significant role in the state of health and disease of the host. Diet, exercise …

Microfluidic systems for infectious disease diagnostics

T Lehnert, MAM Gijs - Lab on a Chip, 2024 - pubs.rsc.org
Microorganisms, encompassing both uni-and multicellular entities, exhibit remarkable
diversity as omnipresent life forms in nature. They play a pivotal role by supplying essential …

Design and construction of a microfluidics workstation for high-throughput multi-wavelength fluorescence and transmittance activated droplet analysis and sorting

J Panwar, A Autour, CA Merten - Nature Protocols, 2023 - nature.com
Droplet microfluidics has revolutionized quantitative high-throughput bioassays and
screening, especially in the field of single-cell analysis where applications include cell …

Gut microbes meet machine learning: the next step towards advancing our understanding of the gut microbiome in health and disease

M Giuffrè, R Moretti, C Tiribelli - International Journal of Molecular …, 2023 - mdpi.com
The human gut microbiome plays a crucial role in human health and has been a focus of
increasing research in recent years. Omics-based methods, such as metagenomics …

[HTML][HTML] Fragmented micro-growth habitats present opportunities for alternative competitive outcomes

M Batsch, I Guex, H Todorov, CM Heiman… - Nature …, 2024 - nature.com
Bacteria in nature often thrive in fragmented environments, like soil pores, plant roots or
plant leaves, leading to smaller isolated habitats, shared with fewer species. This spatial …

Recent advances of machine learning applications in human gut microbiota study: from observational analysis toward causal inference and clinical intervention

F Salim, S Mizutani, M Zolfo, T Yamada - Current Opinion in Biotechnology, 2023 - Elsevier
Highlights•ML facilitates the detection of disease-associated microbial features.•Open data
repository and tool development improves study reproducibility.•Recent methods integrate …

[HTML][HTML] The interplay among radiation therapy, antibiotics and the microbiota: impact on cancer treatment outcomes

KNT Poonacha, TG Villa, V Notario - Antibiotics, 2022 - mdpi.com
Radiation therapy has been used for more than a century, either alone or in combination
with other therapeutic modalities, to treat most types of cancer. On average, radiation …

A guide to biodetection in droplets

S Bartkova, M Zapotoczna, I Sanka… - Analytical …, 2024 - ACS Publications
Droplet-based methods for optical biodetection enable unprecedented high-throughput
experimental parameters. The methods, however, remain underused due to the …