[BOOK][B] Principles of virology, Volume 2: pathogenesis and control

SJ Flint, VR Racaniello, GF Rall, T Hatziioannou… - 2020 - books.google.com
Principles of Virology, the leading virology textbook in use, is an extremely valuable and
highly informative presentation of virology at the interface of modern cell biology and …

The tRNA elbow in structure, recognition and evolution

J Zhang, AR Ferré-D'Amaré - Life, 2016 - mdpi.com
Prominent in the L-shaped three-dimensional structure of tRNAs is the “elbow” where their
two orthogonal helical stacks meet. It has a conserved structure arising from the interaction …

The role of structure in regulatory RNA elements

JN Tants, A Schlundt - Bioscience reports, 2024 - portlandpress.com
Regulatory RNA elements fulfill functions such as translational regulation, control of
transcript levels, and regulation of viral genome replication. Trans-acting factors (ie, RNA …

[PDF][PDF] New functionality of RNAComposer: an application to shape the axis of miR160 precursor structure

M Antczak, M Popenda, T Zok… - Acta Biochimica …, 2016 - frontierspartnerships.org
RNAComposer is a fully automated, web-interfaced system for RNA 3D structure prediction,
freely available at http://rnacomposer. cs. put. poznan. pl/and http://rnacomposer. ibch …

A viral RNA hijacks host machinery using dynamic conformational changes of a tRNA-like structure

SL Bonilla, ME Sherlock, A MacFadden, JS Kieft - Science, 2021 - science.org
Viruses require multifunctional structured RNAs to hijack their host's biochemistry, but their
mechanisms can be obscured by the difficulty of solving conformationally dynamic RNA …

Computer-aided design of RNA-targeted small molecules: A growing need in drug discovery

J Manigrasso, M Marcia, M De Vivo - Chem, 2021 - cell.com
In recent years, researchers have identified certain RNAs as druggable targets for small
molecules to treat several human pathologies. However, these regulatory RNAs are …

Pervasive tertiary structure in the dengue virus RNA genome

EA Dethoff, MA Boerneke… - Proceedings of the …, 2018 - National Acad Sciences
RNA virus genomes are efficient and compact carriers of biological information, encoding
information required for replication both in their primary sequences and in higher-order RNA …

Selective packaging of HIV-1 RNA genome is guided by the stability of 5′ untranslated region polyA stem

OA Nikolaitchik, S Liu, JP Kitzrow… - Proceedings of the …, 2021 - National Acad Sciences
To generate infectious virus, HIV-1 must package two copies of its full-length RNA into
particles. HIV-1 transcription initiates from multiple, neighboring sites, generating RNA …

Unpaired guanosines in the 5′ untranslated region of HIV-1 RNA act synergistically to mediate genome packaging

OA Nikolaitchik, X Somoulay, JMO Rawson… - Journal of …, 2020 - Am Soc Microbiol
The viral protein Gag selects full-length HIV-1 RNA from a large pool of mRNAs as virion
genome during virus assembly. Currently, the precise mechanism that mediates the genome …

The evolution of RNA structural probing methods: from gels to next‐generation sequencing

E Mailler, JC Paillart, R Marquet… - Wiley …, 2019 - Wiley Online Library
RNA molecules are important players in all domains of life and the study of the relationship
between their multiple flexible states and the associated biological roles has increased in …