Quorum sensing in synthetic biology: A review

A Boo, RL Amaro, GB Stan - Current Opinion in Systems Biology, 2021 - Elsevier
In nature, quorum sensing is one of the mechanisms bacterial populations use to
communicate with their own species or across species to coordinate behaviours. For the last …

Ratiometric control of cell phenotypes in monostrain microbial consortia

D Salzano, D Fiore… - Journal of the Royal …, 2022 - royalsocietypublishing.org
We address the problem of regulating and kee** at a desired balance the relative
numbers between cells exhibiting a different phenotype within a monostrain microbial …

Multicellular PI control for gene regulation in microbial consortia

V Martinelli, D Salzano, D Fiore… - IEEE Control Systems …, 2022 - ieeexplore.ieee.org
We describe two multicellular implementations of the classical P and PI feedback controllers
for the regulation of gene expression in a target cell population. Specifically, we propose to …

Autonomous and assisted control for synthetic microbiology

A Banderas, M Le Bec, C Cordier, P Hersen - International Journal of …, 2020 - mdpi.com
The control of microbes and microbial consortia to achieve specific functions requires
synthetic circuits that can reliably cope with internal and external perturbations. Circuits that …

Multicellular pd control in microbial consortia

V Martinelli, D Salzano, D Fiore… - IEEE Control Systems …, 2023 - ieeexplore.ieee.org
We propose a multicellular implementation of a biomolecular PD feedback controller to
regulate gene expression in a microbial consortium. The implementation involves …

Balancing Cell Populations Endowed with a Synthetic Toggle Switch via Adaptive Pulsatile Feedback Control

A Guarino, D Fiore, D Salzano… - ACS synthetic …, 2020 - ACS Publications
The problem of controlling cells endowed with a genetic toggle switch has been recently
highlighted as a benchmark problem in synthetic biology. It has been shown that a carefully …

In-vivo distributed multicellular control of gene expression in microbial consortia

D Salzano, B Shannon, C Grierson, L Marucci… - bioRxiv, 2023 - biorxiv.org
This paper presents an innovative approach in synthetic biology, focusing on the
engineering of biomolecular feedback control systems within microbial consortia to achieve …

Emergent spatiotemporal population dynamics with cell-length control of synthetic microbial consortia

JJ Winkle, BR Karamched, MR Bennett… - PLoS computational …, 2021 - journals.plos.org
The increased complexity of synthetic microbial biocircuits highlights the need for distributed
cell functionality due to concomitant increases in metabolic and regulatory burdens imposed …

Multicellular PID control for robust regulation of biological processes

V Martinelli, D Fiore, D Salzano… - Journal of the Royal …, 2025 - royalsocietypublishing.org
This article presents the first implementation of a proportional-integral-derivative (PID)
biomolecular controller within a consortium of different cell populations, aimed at robust …

Feedback ratiometric control of two microbial populations in a single chemostat

D Fiore, F Della Rossa, A Guarino… - IEEE Control Systems …, 2021 - ieeexplore.ieee.org
We address the problem of controlling the dilution rate in a chemostat to regulate the ratio
between the concentrations of two microbial populations growing in continuous culture. After …