Classical electrostatics for biomolecular simulations
Classical atomistic simulations, also known as molecular mechanics simulations, use simple
potential-energy functions to model molecular systems at the atomic level. In this …
potential-energy functions to model molecular systems at the atomic level. In this …
Next generation interatomic potentials for condensed systems
The computer simulation of condensed systems is a challenging task. While electronic
structure methods like density-functional theory (DFT) usually provide a good compromise …
structure methods like density-functional theory (DFT) usually provide a good compromise …
Non-covalent interactions from a Quantum Chemical Topology perspective
PLA Popelier - Journal of molecular modeling, 2022 - Springer
About half a century after its little-known beginnings, the quantum topological approach
called QTAIM has grown into a widespread, but still not mainstream, methodology of …
called QTAIM has grown into a widespread, but still not mainstream, methodology of …
Representing global reactive potential energy surfaces using Gaussian processes
Representation of multidimensional global potential energy surfaces suitable for spectral
and dynamical calculations from high-level ab initio calculations remains a challenge. Here …
and dynamical calculations from high-level ab initio calculations remains a challenge. Here …
Quantum chemical topology
PLA Popelier - The chemical bond II: 100 years old and getting …, 2016 - Springer
In this frank and thought-provoking account, quantum chemical topology (QCT) is explained
to the novice, leading up highlights of QCT's most recent findings and views. The difference …
to the novice, leading up highlights of QCT's most recent findings and views. The difference …
Kernel regression methods for prediction of materials properties: Recent developments
YM Thant, T Wakamiya, M Nukunudompanich… - Chemical Physics …, 2025 - pubs.aip.org
Machine learning (ML) is increasingly used in chemical physics and materials science. One
major area of thrust is machine learning of properties of molecules and solid materials from …
major area of thrust is machine learning of properties of molecules and solid materials from …
Molecular simulation by knowledgeable quantum atoms
PLA Popelier - Physica Scripta, 2016 - iopscience.iop.org
We are at the dawn of molecular simulations being carried out, literally, by atoms endowed
by knowledge of how to behave quantum mechanically in the vicinity of other atoms …
by knowledge of how to behave quantum mechanically in the vicinity of other atoms …
How deeply should we analyze non-covalent interactions?
T Clark - Journal of Molecular Modeling, 2023 - Springer
Context Just how much effort and detail should we invest in analyzing interactions of the
order of 5 kcal mol− 1? This comment attempts to provide a conciliatory overview of what is …
order of 5 kcal mol− 1? This comment attempts to provide a conciliatory overview of what is …
Interpolation of intermolecular potentials using Gaussian processes
A procedure is proposed to produce intermolecular potential energy surfaces from limited
data. The procedure involves generation of geometrical configurations using a Latin …
data. The procedure involves generation of geometrical configurations using a Latin …
Machine learning for non-additive intermolecular potentials: quantum chemistry to first-principles predictions
RS Graham, RJ Wheatley - Chemical Communications, 2022 - pubs.rsc.org
Prediction of thermophysical properties from molecular principles requires accurate potential
energy surfaces (PES). We present a widely-applicable method to produce first-principles …
energy surfaces (PES). We present a widely-applicable method to produce first-principles …