Mechanisms of lncRNA biogenesis as revealed by nascent transcriptomics

T Nojima, NJ Proudfoot - Nature reviews Molecular cell biology, 2022 - nature.com
Mammalian genomes express two principal gene categories through RNA polymerase II-
mediated transcription: protein-coding transcription units and non-coding RNA transcription …

[HTML][HTML] The role of alternative splicing in cancer: From oncogenesis to drug resistance

R Sciarrillo, A Wojtuszkiewicz, YG Assaraf… - Drug Resistance …, 2020 - Elsevier
Alternative splicing is a tightly regulated process whereby non-coding sequences of pre-
mRNA are removed and protein-coding segments are assembled in diverse combinations …

Pol II phosphorylation regulates a switch between transcriptional and splicing condensates

YE Guo, JC Manteiga, JE Henninger, BR Sabari… - Nature, 2019 - nature.com
The synthesis of pre-mRNA by RNA polymerase II (Pol II) involves the formation of a
transcription initiation complex, and a transition to an elongation complex,,–. The large …

Mouse totipotent stem cells captured and maintained through spliceosomal repression

H Shen, M Yang, S Li, J Zhang, B Peng, C Wang… - Cell, 2021 - cell.com
Since establishment of the first embryonic stem cells (ESCs), in vitro culture of totipotent cells
functionally and molecularly comparable with in vivo blastomeres with embryonic and …

H3B-8800, an orally available small-molecule splicing modulator, induces lethality in spliceosome-mutant cancers

M Seiler, A Yoshimi, R Darman, B Chan, G Keaney… - Nature medicine, 2018 - nature.com
Genomic analyses of cancer have identified recurrent point mutations in the RNA splicing
factor–encoding genes SF3B1, U2AF1, and SRSF2 that confer an alteration of function …

Alternative splicing control of abiotic stress responses

T Laloum, G Martín, P Duque - Trends in plant science, 2018 - cell.com
Alternative splicing, which generates multiple transcripts from the same gene, is an
important modulator of gene expression that can increase proteome diversity and regulate …

Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15

T Han, M Goralski, N Gaskill, E Capota, J Kim, TC Ting… - Science, 2017 - science.org
INTRODUCTION Indisulam is an aryl sulfonamide drug that inhibits the proliferation of
certain human cancer cell lines. Its mechanism of action and the mechanism underlying its …

RNA splicing factors as oncoproteins and tumour suppressors

H Dvinge, E Kim, O Abdel-Wahab… - Nature Reviews Cancer, 2016 - nature.com
The recent genomic characterization of cancers has revealed recurrent somatic point
mutations and copy number changes affecting genes encoding RNA splicing factors. Initial …

[HTML][HTML] Proteomic discovery of chemical probes that perturb protein complexes in human cells

MR Lazear, JR Remsberg, MG Jaeger, K Rothamel… - Molecular cell, 2023 - cell.com
Most human proteins lack chemical probes, and several large-scale and generalizable small-
molecule binding assays have been introduced to address this problem. How compounds …

Therapeutic targeting of splicing in cancer

SCW Lee, O Abdel-Wahab - Nature medicine, 2016 - nature.com
Recent studies have highlighted that splicing patterns are frequently altered in cancer and
that mutations in genes encoding spliceosomal proteins, as well as mutations affecting the …