Lessons in de novo peptide sequencing by tandem mass spectrometry
KF Medzihradszky, RJ Chalkley - Mass spectrometry reviews, 2015 - Wiley Online Library
Mass spectrometry has become the method of choice for the qualitative and quantitative
characterization of protein mixtures isolated from all kinds of living organisms. The raw data …
characterization of protein mixtures isolated from all kinds of living organisms. The raw data …
Peptide radicals and cation radicals in the gas phase
For about three decades, the chemistry of cation radicals derived from organic molecules
had received a major impetus from mass spectrometry. This was because cation radicals …
had received a major impetus from mass spectrometry. This was because cation radicals …
Analysis of mammalian O-glycopeptides—we have made a good start, but there is a long way to go
Z Darula, KF Medzihradszky - Molecular & Cellular Proteomics, 2018 - ASBMB
Glycosylation is perhaps the most common post-translational modification. Recently there
has been growing interest in cataloging the glycan structures, glycoproteins, and specific …
has been growing interest in cataloging the glycan structures, glycoproteins, and specific …
Mechanisms for S–S and N–Cα bond cleavage in peptide ECD and ETD mass spectrometry
J Simons - Chemical Physics Letters, 2010 - Elsevier
This Letter reviews efforts made to elucidate the mechanism by which electron-capture and
electron-transfer dissociation bond cleavages occur in mass spectrometry. The primary …
electron-transfer dissociation bond cleavages occur in mass spectrometry. The primary …
Affinity enrichment and characterization of mucin core-1 type glycopeptides from bovine serum
Z Darula, KF Medzihradszky - Molecular & Cellular Proteomics, 2009 - ASBMB
The lack of consensus sequence, common core structure, and universal endoglycosidase
for the release of O-linked oligosaccharides makes O-glycosylation more difficult to tackle …
for the release of O-linked oligosaccharides makes O-glycosylation more difficult to tackle …
Where does the electron go? Electron distribution and reactivity of peptide cation radicals formed by electron transfer in the gas phase
X Chen, C Hao - Journal of the American Chemical Society, 2008 - ACS Publications
We report the first detailed analysis at correlated levels of ab initio theory of experimentally
studied peptide cations undergoing charge reduction by collisional electron transfer and …
studied peptide cations undergoing charge reduction by collisional electron transfer and …
Effects of cation charge-site identity and position on electron-transfer dissociation of polypeptide cations
Y **a, HP Gunawardena, DE Erickson… - Journal of the …, 2007 - ACS Publications
The effect of cation charge site on gas-phase ion/ion reactions between multiply protonated
model peptides and singly charged anions has been examined. Insights are drawn from the …
model peptides and singly charged anions has been examined. Insights are drawn from the …
Electron attachment step in electron capture dissociation (ECD) and electron transfer dissociation (ETD)
I Anusiewicz, J Berdys-Kochanska… - The Journal of Physical …, 2005 - ACS Publications
We have made use of classical dynamics trajectory simultions and ab initio electronic
structure calculations to estimate the cross sections with which electrons are attached (in …
structure calculations to estimate the cross sections with which electrons are attached (in …
Dissociation techniques in mass spectrometry-based proteomics
The field of proteomics, the large-scale analysis of proteins, has undergone a huge
expansion over the past decade. Mass spectrometry-based proteomics relies on the …
expansion over the past decade. Mass spectrometry-based proteomics relies on the …
Probing the mechanism of electron capture and electron transfer dissociation using tags with variable electron affinity
Electron capture dissociation (ECD) and electron transfer dissociation (ETD) of doubly
protonated electron affinity (EA)-tuned peptides were studied to further illuminate the …
protonated electron affinity (EA)-tuned peptides were studied to further illuminate the …