How chromosomal inversions reorient the evolutionary process

EL Berdan, NH Barton, R Butlin… - Journal of …, 2023 - academic.oup.com
Inversions are structural mutations that reverse the sequence of a chromosome segment
and reduce the effective rate of recombination in the heterozygous state. They play a major …

Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence

PJ Wittkopp, G Kalay - Nature Reviews Genetics, 2012 - nature.com
Cis-regulatory sequences, such as enhancers and promoters, control development and
physiology by regulating gene expression. Mutations that affect the function of these …

Single-fly genome assemblies fill major phylogenomic gaps across the Drosophilidae Tree of Life

BY Kim, HR Gellert, SH Church, A Suvorov… - PLoS …, 2024 - journals.plos.org
Long-read sequencing is driving rapid progress in genome assembly across all major
groups of life, including species of the family Drosophilidae, a longtime model system for …

Genetics on the Fly: A Primer on the Drosophila Model System

KG Hales, CA Korey, AM Larracuente, DM Roberts - Genetics, 2015 - academic.oup.com
Fruit flies of the genus Drosophila have been an attractive and effective genetic model
organism since Thomas Hunt Morgan and colleagues made seminal discoveries with them …

Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology

AC English, S Richards, Y Han, M Wang, V Vee, J Qu… - PloS one, 2012 - journals.plos.org
Many genomes have been sequenced to high-quality draft status using Sanger capillary
electrophoresis and/or newer short-read sequence data and whole genome assembly …

A decade of 3C technologies: insights into nuclear organization

E De Wit, W De Laat - Genes & development, 2012 - genesdev.cshlp.org
Over the past 10 years, the development of chromosome conformation capture (3C)
technology and the subsequent genomic variants thereof have enabled the analysis of …

Intronic microRNA precursors that bypass Drosha processing

JG Ruby, CH Jan, DP Bartel - Nature, 2007 - nature.com
Abstract MicroRNAs (miRNAs) are∼ 22-nucleotide endogenous RNAs that often repress the
expression of complementary messenger RNAs. In animals, miRNAs derive from …

Ancient protostome origin of chemosensory ionotropic glutamate receptors and the evolution of insect taste and olfaction

V Croset, R Rytz, SF Cummins, A Budd… - PLoS …, 2010 - journals.plos.org
Ionotropic glutamate receptors (iGluRs) are a highly conserved family of ligand-gated ion
channels present in animals, plants, and bacteria, which are best characterized for their …

The complete genome of an individual by massively parallel DNA sequencing

DA Wheeler, M Srinivasan, M Egholm, Y Shen, L Chen… - nature, 2008 - nature.com
The association of genetic variation with disease and drug response, and improvements in
nucleic acid technologies, have given great optimism for the impact of 'genomic medicine' …

[HTML][HTML] Evolution of genes and genomes on the Drosophila phylogeny

AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver… - Nature, 2007 - hal.science
Comparative analysis of multiple genomes in a phylogenetic framework dramatically
improves the precision and sensitivity of evolutionary inference, producing more robust …