Intertwining roles of R-loops and G-quadruplexes in DNA repair, transcription and genome organization
R-loops are three-stranded nucleic acid structures that are abundant and widespread across
the genome and that have important physiological roles in many nuclear processes. Their …
the genome and that have important physiological roles in many nuclear processes. Their …
The DNA damage response and inflammation in cancer
Genomic stability in normal cells is crucial to avoid oncogenesis. Accordingly, multiple
components of the DNA damage response (DDR) operate as bona fide tumor suppressor …
components of the DNA damage response (DDR) operate as bona fide tumor suppressor …
PARP1 associates with R-loops to promote their resolution and genome stability
PARP1 is a DNA-dependent ADP-Ribose transferase with ADP-ribosylation activity that is
triggered by DNA breaks and non-B DNA structures to mediate their resolution. PARP1 was …
triggered by DNA breaks and non-B DNA structures to mediate their resolution. PARP1 was …
DDX41 is required for cGAS-STING activation against DNA virus infection
Upon binding double-stranded DNA (dsDNA), cyclic GMP-AMP synthase (cGAS) is activated
and initiates the cGAS-stimulator of IFN genes (STING)-type I interferon pathway. DEAD-box …
and initiates the cGAS-stimulator of IFN genes (STING)-type I interferon pathway. DEAD-box …
G-quadruplexes associated with R-loops promote CTCF binding
CTCF is a critical regulator of genome architecture and gene expression that binds
thousands of sites on chromatin. CTCF genomic localization is controlled by the recognition …
thousands of sites on chromatin. CTCF genomic localization is controlled by the recognition …
Transcription–replication conflicts as a source of genome instability
Transcription and replication both require large macromolecular complexes to act on a DNA
template, yet these machineries cannot simultaneously act on the same DNA sequence …
template, yet these machineries cannot simultaneously act on the same DNA sequence …
RNA biogenesis and RNA metabolism factors as R-loop suppressors: a hidden role in genome integrity
R Luna, B Gómez-González… - Genes & …, 2024 - genesdev.cshlp.org
Genome integrity relies on the accuracy of DNA metabolism, but as appreciated for more
than four decades, transcription enhances mutation and recombination frequencies. More …
than four decades, transcription enhances mutation and recombination frequencies. More …
The chromatin-associated RNAs in gene regulation and cancer
J Tang, X Wang, D **ao, S Liu, Y Tao - Molecular Cancer, 2023 - Springer
Eukaryotic genomes are prevalently transcribed into many types of RNAs that translate into
proteins or execute gene regulatory functions. Many RNAs associate with chromatin directly …
proteins or execute gene regulatory functions. Many RNAs associate with chromatin directly …
DEAD-box RNA helicases and genome stability
DEAD-box RNA helicases are important regulators of RNA metabolism and have been
implicated in the development of cancer. Interestingly, these helicases constitute a major …
implicated in the development of cancer. Interestingly, these helicases constitute a major …
DDX18 prevents R-loop-induced DNA damage and genome instability via PARP-1
R loops occur frequently in genomes and contribute to fundamental biological processes at
multiple levels. Consequently, understanding the molecular and cellular biology of R loops …
multiple levels. Consequently, understanding the molecular and cellular biology of R loops …