A network control theory pipeline for studying the dynamics of the structural connectome

L Parkes, JZ Kim, J Stiso, JK Brynildsen, M Cieslak… - Nature protocols, 2024 - nature.com
Network control theory (NCT) is a simple and powerful tool for studying how network
topology informs and constrains the dynamics of a system. Compared to other structure …

Spatial embedding imposes constraints on neuronal network architectures

J Stiso, DS Bassett - Trends in cognitive sciences, 2018 - cell.com
Recent progress towards understanding circuit function has capitalized on tools from
network science to parsimoniously describe the spatiotemporal architecture of neural …

White matter network architecture guides direct electrical stimulation through optimal state transitions

J Stiso, AN Khambhati, T Menara, AE Kahn, JM Stein… - Cell reports, 2019 - cell.com
Optimizing direct electrical stimulation for the treatment of neurological disease remains
difficult due to an incomplete understanding of its physical propagation through brain tissue …

Asymmetric signaling across the hierarchy of cytoarchitecture within the human connectome

L Parkes, JZ Kim, J Stiso, ME Calkins, M Cieslak… - Science …, 2022 - science.org
Cortical variations in cytoarchitecture form a sensory-fugal axis that shapes regional profiles
of extrinsic connectivity and is thought to guide signal propagation and integration across …

Structural controllability of symmetric networks

T Menara, DS Bassett… - IEEE Transactions on …, 2018 - ieeexplore.ieee.org
The theory of structural controllability allows us to assess controllability of a network as a
function of its interconnection graph and independently of the edge weights. Yet, existing …

A unifying framework for strong structural controllability

J Jia, HJ Van Waarde, HL Trentelman… - IEEE Transactions on …, 2020 - ieeexplore.ieee.org
This article deals with strong structural controllability of linear systems. In contrast to the
existing work, the structured systems studied in this article have a so-called …

A framework to control functional connectivity in the human brain

T Menara, G Baggio, DS Bassett… - 2019 IEEE 58th …, 2019 - ieeexplore.ieee.org
In this paper, we propose a framework to control brain-wide functional connectivity by
selectively acting on the brain's structure and parameters. Functional connectivity, which …

Benchmarking measures of network controllability on canonical graph models

E Wu-Yan, RF Betzel, E Tang, S Gu… - Journal of Nonlinear …, 2020 - Springer
The control of networked dynamical systems opens the possibility for new discoveries and
therapies in systems biology and neuroscience. Recent theoretical advances provide …

Functional target controllability of networks: Structural properties and efficient algorithms

C Commault, J van der Woude… - IEEE Transactions on …, 2019 - ieeexplore.ieee.org
In this paper we consider the problem of controlling a limited number of target nodes of a
network. Equivalently, we can see this problem as controlling the target variables of a …

RE: Warnings and caveats in brain controllability

F Pasqualetti, S Gu, DS Bassett - NeuroImage, 2019 - Elsevier
The use of network control theory to analyze the organization of white matter fibers in the
human brain has the potential to enable mechanistic theories of cognition, and to inform the …