Genomic selection in plant breeding: knowledge and prospects

AJ Lorenz, S Chao, FG Asoro, EL Heffner… - Advances in …, 2011 - Elsevier
Abstract “Genomic selection,” the ability to select for even complex, quantitative traits based
on marker data alone, has arisen from the conjunction of new high-throughput marker …

Integrating omic approaches for abiotic stress tolerance in soybean

R Deshmukh, H Sonah, G Patil, W Chen… - Frontiers in Plant …, 2014 - frontiersin.org
Soybean production is greatly influenced by abiotic stresses imposed by environmental
factors such as drought, water submergence, salt, and heavy metals. A thorough …

Development and evaluation of SoySNP50K, a high-density genoty** array for soybean

Q Song, DL Hyten, G Jia, CV Quigley, EW Fickus… - PloS one, 2013 - journals.plos.org
The objective of this research was to identify single nucleotide polymorphisms (SNPs) and to
develop an Illumina Infinium BeadChip that contained over 50,000 SNPs from soybean …

A genome-wide association study of seed protein and oil content in soybean

EY Hwang, Q Song, G Jia, JE Specht, DL Hyten… - BMC genomics, 2014 - Springer
Background Association analysis is an alternative to conventional family-based methods to
detect the location of gene (s) or quantitative trait loci (QTL) and provides relatively high …

An improved genoty** by sequencing (GBS) approach offering increased versatility and efficiency of SNP discovery and genoty**

H Sonah, M Bastien, E Iquira, A Tardivel, G Légaré… - PloS one, 2013 - journals.plos.org
Highly parallel SNP genoty** platforms have been developed for some important crop
species, but these platforms typically carry a high cost per sample for first-time or small-scale …

Molecular markers and selection for complex traits in plants: learning from the last 20 years

R Bernardo - Crop science, 2008 - Wiley Online Library
In the mid‐1980s, the development of abundant molecular markers, appropriate statistical
procedures, and user‐friendly computer software that implemented these statistical …

Large‐scale development of cost‐effective SNP marker assays for diversity assessment and genetic map** in chickpea and comparative map** in legumes

PJ Hiremath, A Kumar, RV Penmetsa… - Plant biotechnology …, 2012 - Wiley Online Library
A set of 2486 single nucleotide polymorphisms (SNPs) were compiled in chickpea using four
approaches, namely (i) Solexa/Illumina sequencing (1409),(ii) amplicon sequencing of …

Array-based high-throughput DNA markers for crop improvement

PK Gupta, S Rustgi, RR Mir - Heredity, 2008 - nature.com
The last two decades have witnessed a remarkable activity in the development and use of
molecular markers both in animal and plant systems. This activity started with low …

A high density integrated genetic linkage map of soybean and the development of a 1536 universal soy linkage panel for quantitative trait locus map**

DL Hyten, IY Choi, Q Song, JE Specht, TE Carter… - Crop …, 2010 - Wiley Online Library
Single nucleotide polymorphisms (SNPs) are the marker of choice for many researchers due
to their abundance and the high‐throughput methods available for their multiplex analysis …

Single nucleotide polymorphism genoty** in polyploid wheat with the Illumina GoldenGate assay

E Akhunov, C Nicolet, J Dvorak - Theoretical and Applied Genetics, 2009 - Springer
Single nucleotide polymorphisms (SNPs) are indispensable in such applications as
association map** and construction of high-density genetic maps. These applications …