An updated classification of cyanobacterial orders and families based on phylogenomic and polyphasic analysis
O Strunecký, AP Ivanova, J Mareš - Journal of Phycology, 2023 - Wiley Online Library
Cyanobacterial taxonomy is facing a period of rapid changes thanks to the ease of 16S
rRNA gene sequencing and established workflows for description of new taxa. Since the last …
rRNA gene sequencing and established workflows for description of new taxa. Since the last …
The Ecology of Acidobacteria: Moving beyond Genes and Genomes
AM Kielak, CC Barreto, GA Kowalchuk… - Frontiers in …, 2016 - frontiersin.org
The phylum Acidobacteria is one of the most widespread and abundant on the planet, yet
remarkably our knowledge of the role of these diverse organisms in the functioning of …
remarkably our knowledge of the role of these diverse organisms in the functioning of …
MEGA11: molecular evolutionary genetics analysis version 11
Abstract The Molecular Evolutionary Genetics Analysis (MEGA) software has matured to
contain a large collection of methods and tools of computational molecular evolution. Here …
contain a large collection of methods and tools of computational molecular evolution. Here …
[HTML][HTML] A new coronavirus associated with human respiratory disease in China
F Wu, S Zhao, B Yu, YM Chen, W Wang, ZG Song… - Nature, 2020 - nature.com
Emerging infectious diseases, such as severe acute respiratory syndrome (SARS) and Zika
virus disease, present a major threat to public health 1, 2, 3. Despite intense research efforts …
virus disease, present a major threat to public health 1, 2, 3. Despite intense research efforts …
Complete genomic and epigenetic maps of human centromeres
Existing human genome assemblies have almost entirely excluded repetitive sequences
within and near centromeres, limiting our understanding of their organization, evolution, and …
within and near centromeres, limiting our understanding of their organization, evolution, and …
MEGA6: molecular evolutionary genetics analysis version 6.0
K Tamura, G Stecher, D Peterson… - … biology and evolution, 2013 - academic.oup.com
We announce the release of an advanced version of the Molecular Evolutionary Genetics
Analysis (MEGA) software, which currently contains facilities for building sequence …
Analysis (MEGA) software, which currently contains facilities for building sequence …
SDT: a virus classification tool based on pairwise sequence alignment and identity calculation
The perpetually increasing rate at which viral full-genome sequences are being determined
is creating a pressing demand for computational tools that will aid the objective classification …
is creating a pressing demand for computational tools that will aid the objective classification …
[PDF][PDF] Expanded classification of hepatitis C virus into 7 genotypes and 67 subtypes: updated criteria and genotype assignment web resource
The 2005 consensus proposal for the classification of hepatitis C virus (HCV) presented an
agreed and uniform nomenclature for HCV variants and the criteria for their assignment into …
agreed and uniform nomenclature for HCV variants and the criteria for their assignment into …
Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative map** approach
We present an in silico approach for the reconstruction of complete mitochondrial genomes
of non-model organisms directly from next-generation sequencing (NGS) data …
of non-model organisms directly from next-generation sequencing (NGS) data …
New world bats harbor diverse influenza A viruses
Aquatic birds harbor diverse influenza A viruses and are a major viral reservoir in nature.
The recent discovery of influenza viruses of a new H17N10 subtype in Central American fruit …
The recent discovery of influenza viruses of a new H17N10 subtype in Central American fruit …