Synthetic chromosomes, genomes, viruses, and cells

JC Venter, JI Glass, CA Hutchison, S Vashee - Cell, 2022 - cell.com
Synthetic genomics is the construction of viruses, bacteria, and eukaryotic cells with
synthetic genomes. It involves two basic processes: synthesis of complete genomes or …

Hold out the genome: a roadmap to solving the cis-regulatory code

CG de Boer, J Taipale - Nature, 2024 - nature.com
Gene expression is regulated by transcription factors that work together to read cis-
regulatory DNA sequences. The 'cis-regulatory code'—how cells interpret DNA sequences …

A swapped genetic code prevents viral infections and gene transfer

A Nyerges, S Vinke, R Flynn, SV Owen, EA Rand… - Nature, 2023 - nature.com
Engineering the genetic code of an organism has been proposed to provide a firewall from
natural ecosystems by preventing viral infections and gene transfer,,,,–. However, numerous …

Mutation effects predicted from sequence co-variation

TA Hopf, JB Ingraham, FJ Poelwijk, CPI Schärfe… - Nature …, 2017 - nature.com
Many high-throughput experimental technologies have been developed to assess the
effects of large numbers of mutations (variation) on phenotypes. However, designing …

Direct surface-enhanced Raman scattering (SERS) spectroscopy of nucleic acids: From fundamental studies to real-life applications

E Garcia-Rico, RA Alvarez-Puebla… - Chemical Society …, 2018 - pubs.rsc.org
Plasmonic optical biosensors for the analysis of nucleic acids have drawn a great deal of
interest in nanomedicine because of their capability to overcome major limitations of …

Trends in next-generation sequencing and a new era for whole genome sequencing

ST Park, J Kim - International neurourology journal, 2016 - pmc.ncbi.nlm.nih.gov
This article is a mini-review that provides a general overview for next-generation sequencing
(NGS) and introduces one of the most popular NGS applications, whole genome …

Mouse genome rewriting and tailoring of three important disease loci

W Zhang, I Golynker, R Brosh, A Fajardo, Y Zhu… - Nature, 2023 - nature.com
Genetically engineered mouse models (GEMMs) help us to understand human pathologies
and develop new therapies, yet faithfully recapitulating human diseases in mice is …

Future trends in synthetic biology—a report

M El Karoui, M Hoyos-Flight, L Fletcher - Frontiers in bioengineering …, 2019 - frontiersin.org
Leading researchers working on synthetic biology and its applications gathered at the
University of Edinburgh in May 2018 to discuss the latest challenges and opportunities in the …

Enabling technology and core theory of synthetic biology

XE Zhang, C Liu, J Dai, Y Yuan, C Gao, Y Feng… - Science China Life …, 2023 - Springer
Synthetic biology provides a new paradigm for life science research (“build to learn”) and
opens the future journey of biotechnology (“build to use”). Here, we discuss advances of …

Human genomics projects and precision medicine

F Carrasco-Ramiro, R Peiró-Pastor, B Aguado - Gene therapy, 2017 - nature.com
The completion of the Human Genome Project (HGP) in 2001 opened the floodgates to a
deeper understanding of medicine. There are dozens of HGP-like projects which involve …