Molecular‐clock methods for estimating evolutionary rates and timescales

SYW Ho, S Duchêne - Molecular ecology, 2014 - Wiley Online Library
The molecular clock presents a means of estimating evolutionary rates and timescales using
genetic data. These estimates can lead to important insights into evolutionary processes and …

Tangled up in two: a burst of genome duplications at the end of the Cretaceous and the consequences for plant evolution

K Vanneste, S Maere… - … Transactions of the …, 2014 - royalsocietypublishing.org
Genome sequencing has demonstrated that besides frequent small-scale duplications, large-
scale duplication events such as whole genome duplications (WGDs) are found on many …

Estimating the timing of early eukaryotic diversification with multigene molecular clocks

LW Parfrey, DJG Lahr, AH Knoll… - Proceedings of the …, 2011 - National Acad Sciences
Although macroscopic plants, animals, and fungi are the most familiar eukaryotes, the bulk
of eukaryotic diversity is microbial. Elucidating the timing of diversification among the more …

Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous–Paleogene boundary

K Vanneste, G Baele, S Maere… - Genome research, 2014 - genome.cshlp.org
Ancient whole-genome duplications (WGDs), also referred to as paleopolyploidizations,
have been reported in most evolutionary lineages. Their attributed role remains a major …

Resolution of Brassicaceae phylogeny using nuclear genes uncovers nested radiations and supports convergent morphological evolution

CH Huang, R Sun, YI Hu, L Zeng… - Molecular biology …, 2016 - academic.oup.com
Brassicaceae is one of the most diverse and economically valuable angiosperm families
with widely cultivated vegetable crops and scientifically important model plants, such as …

The age and diversification of the angiosperms re‐revisited

CD Bell, DE Soltis, PS Soltis - American journal of botany, 2010 - Wiley Online Library
• Premise of the study: It has been 8 years since the last comprehensive analysis of
divergence times across the angiosperms. Given recent methodological improvements in …

Testing the Impact of Calibration on Molecular Divergence Times Using a Fossil-Rich Group: The Case of Nothofagus (Fagales)

H Sauquet, SYW Ho, MA Gandolfo, GJ Jordan… - Systematic …, 2012 - academic.oup.com
Although temporal calibration is widely recognized as critical for obtaining accurate
divergence-time estimates using molecular dating methods, few studies have evaluated the …

[HTML][HTML] Estimating the Phanerozoic history of the Ascomycota lineages: combining fossil and molecular data

C Beimforde, K Feldberg, S Nylinder, J Rikkinen… - Molecular phylogenetics …, 2014 - Elsevier
The phylum Ascomycota is by far the largest group in the fungal kingdom. Ecologically
important mutualistic associations such as mycorrhizae and lichens have evolved in this …

[HTML][HTML] Myrteae phylogeny, calibration, biogeography and diversification patterns: increased understanding in the most species rich tribe of Myrtaceae

TNC Vasconcelos, CEB Proença, B Ahmad… - Molecular phylogenetics …, 2017 - Elsevier
Abstract Myrteae (c. 2500 species; 51 genera) is the largest tribe of Myrtaceae and an
ecologically important groups of angiosperms in the Neotropics. Systematic relationships in …

Changes in the functional diversity of modern bird species over the last million years

RR Germain, S Feng, L Buffan… - Proceedings of the …, 2023 - National Acad Sciences
Despite evidence of declining biosphere integrity, we currently lack understanding of how
the functional diversity associated with changes in abundance among ecological …