Evolution of the human pathogenic lifestyle in fungi

A Rokas - Nature Microbiology, 2022 - nature.com
Fungal pathogens cause more than a billion human infections every year, resulting in more
than 1.6 million deaths annually. Understanding the natural history and evolutionary ecology …

Best practices in metabarcoding of fungi: from experimental design to results

L Tedersoo, M Bahram, L Zinger, RH Nilsson… - Molecular …, 2022 - Wiley Online Library
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …

Soil microbiome indicators can predict crop growth response to large-scale inoculation with arbuscular mycorrhizal fungi

S Lutz, N Bodenhausen, J Hess, A Valzano-Held… - Nature …, 2023 - nature.com
Alternative solutions to mineral fertilizers and pesticides that reduce the environmental
impact of agriculture are urgently needed. Arbuscular mycorrhizal fungi (AMF) can enhance …

Reduction of microbial diversity in grassland soil is driven by long-term climate warming

L Wu, Y Zhang, X Guo, D Ning, X Zhou, J Feng… - Nature …, 2022 - nature.com
Anthropogenic climate change threatens ecosystem functioning. Soil biodiversity is essential
for maintaining the health of terrestrial systems, but how climate change affects the richness …

Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities

C Gao, L Xu, L Montoya, M Madera… - Nature …, 2022 - nature.com
Plant response to drought stress involves fungi and bacteria that live on and in plants and in
the rhizosphere, yet the stability of these myco-and micro-biomes remains poorly …

Aridity-driven shift in biodiversity–soil multifunctionality relationships

W Hu, J Ran, L Dong, Q Du, M Ji, S Yao, Y Sun… - Nature …, 2021 - nature.com
Relationships between biodiversity and multiple ecosystem functions (that is, ecosystem
multifunctionality) are context-dependent. Both plant and soil microbial diversity have been …

Global hotspots for soil nature conservation

CA Guerra, M Berdugo, DJ Eldridge, N Eisenhauer… - Nature, 2022 - nature.com
Soils are the foundation of all terrestrial ecosystems. However, unlike for plants and animals,
a global assessment of hotspots for soil nature conservation is still lacking. This hampers our …

Wildfire-dependent changes in soil microbiome diversity and function

AR Nelson, AB Narrowe, CC Rhoades, TS Fegel… - Nature …, 2022 - nature.com
Forest soil microbiomes have crucial roles in carbon storage, biogeochemical cycling and
rhizosphere processes. Wildfire season length, and the frequency and size of severe fires …

Environmental stress destabilizes microbial networks

DJ Hernandez, AS David, ES Menges… - The ISME …, 2021 - academic.oup.com
Environmental stress is increasing worldwide, yet we lack a clear picture of how stress
disrupts the stability of microbial communities and the ecosystem services they provide …

microeco: an R package for data mining in microbial community ecology

C Liu, Y Cui, X Li, M Yao - FEMS microbiology ecology, 2021 - academic.oup.com
ABSTRACT A large amount of sequencing data is produced in microbial community ecology
studies using the high-throughput sequencing technique, especially amplicon-sequencing …