[HTML][HTML] Recent developments and innovations in solid state fermentation

CR Soccol, ESF Da Costa, LAJ Letti, SG Karp… - Biotechnology Research …, 2017 - Elsevier
After forty years of research development, an overview of solid-state fermentation (SSF),
focusing on its applications, mainly of the very recent papers of the last five years, is …

The epigenetic control of the transposable element life cycle in plant genomes and beyond

P Liu, D Cuerda-Gil, S Shahid… - Annual Review of …, 2022 - annualreviews.org
Within the life cycle of a living organism, another life cycle exists for the selfish genome
inhabitants, which are called transposable elements (TEs). These mobile sequences invade …

[HTML][HTML] Kombucha: a novel model system for cooperation and conflict in a complex multi-species microbial ecosystem

A May, S Narayanan, J Alcock, A Varsani, C Maley… - PeerJ, 2019 - peerj.com
Kombucha, a fermented tea beverage with an acidic and effervescent taste, is composed of
a multispecies microbial ecosystem with complex interactions that are characterized by both …

Fungal evolution: cellular, genomic and metabolic complexity

MA Naranjo‐Ortiz, T Gabaldón - Biological Reviews, 2020 - Wiley Online Library
The question of how phenotypic and genomic complexity are inter‐related and how they are
shaped through evolution is a central question in biology that historically has been …

Molecular basis and regulation of pathogenicity and patulin biosynthesis in Penicillium expansum

B Li, Y Chen, Z Zhang, G Qin, T Chen… - … Reviews in Food …, 2020 - Wiley Online Library
Penicillium expansum is a necrotrophic plant pathogen with a wide range of fruit hosts. It
causes blue mold rot during fruit storage, transport, and sale, resulting in huge economic …

Recent past, present, and future of the food microbiome

F De Filippis, E Parente, D Ercolini - Annual Review of Food …, 2018 - annualreviews.org
Sequencing technologies have deeply changed our approach to the study of food microbial
communities. This review describes recent exploitations of high-throughput sequencing …

Starships are active eukaryotic transposable elements mobilized by a new family of tyrosine recombinases

AS Urquhart, AA Vogan, DM Gardiner… - Proceedings of the …, 2023 - pnas.org
Transposable elements in eukaryotic organisms have historically been considered “selfish,”
at best conferring indirect benefits to their host organisms. The Starships are a recently …

Domestication of the emblematic white cheese-making fungus Penicillium camemberti and its diversification into two varieties

J Ropars, E Didiot, RCR de La Vega, B Bennetot… - Current Biology, 2020 - cell.com
Domestication involves recent adaptation under strong human selection and rapid
diversification and therefore constitutes a good model for studies of these processes. We …

Transposon-mediated horizontal transfer of the host-specific virulence protein ToxA between three fungal wheat pathogens

MC McDonald, AP Taranto, E Hill, B Schwessinger… - MBio, 2019 - journals.asm.org
Most known examples of horizontal gene transfer (HGT) between eukaryotes are ancient.
These events are identified primarily using phylogenetic methods on coding regions alone …

A large transposable element mediates metal resistance in the fungus Paecilomyces variotii

AS Urquhart, NF Chong, Y Yang, A Idnurm - Current Biology, 2022 - cell.com
The horizontal transfer of large gene clusters by mobile elements is a key driver of
prokaryotic adaptation in response to environmental stresses. Eukaryotic microbes face …