Epigenetics, DNA damage, and aging

C Soto-Palma, LJ Niedernhofer, CD Faulk… - The Journal of clinical …, 2022 - jci.org
Over the course of a human lifespan, genome integrity erodes, leading to an increased
abundance of several types of chromatin changes. The abundance of DNA lesions …

Histone methylation and the DNA damage response

F Gong, KM Miller - Mutation Research/Reviews in Mutation Research, 2019 - Elsevier
Preserving genome function and stability are paramount for ensuring cellular homeostasis,
an imbalance in which can promote diseases including cancer. In the presence of DNA …

NAD+ consumption by PARP1 in response to DNA damage triggers metabolic shift critical for damaged cell survival

MM Murata, X Kong, E Moncada, Y Chen… - Molecular biology of …, 2019 - molbiolcell.org
DNA damage signaling is critical for the maintenance of genome integrity and cell fate
decision. Poly (ADP-ribose) polymerase 1 (PARP1) is a DNA damage sensor rapidly …

Histone demethylases in chromatin biology and beyond

E Dimitrova, AH Turberfield, RJ Klose - EMBO reports, 2015 - embopress.org
Histone methylation plays fundamental roles in regulating chromatin‐based processes. With
the discovery of histone demethylases over a decade ago, it is now clear that histone …

Histone demethylase KDM5A regulates the ZMYND8–NuRD chromatin remodeler to promote DNA repair

F Gong, T Clouaire, M Aguirrebengoa, G Legube… - Journal of Cell …, 2017 - rupress.org
Upon DNA damage, histone modifications are dynamically reshaped to accommodate DNA
damage signaling and repair within chromatin. In this study, we report the identification of …

Epigenetic regulation by histone demethylases in hypoxia

RL Hancock, K Dunne, LJ Walport, E Flashman… - …, 2015 - Taylor & Francis
The response to hypoxia is primarily mediated by the hypoxia-inducible transcription factor
(HIF). Levels of HIF are regulated by the oxygen-sensing HIF hydroxylases, members of the …

New facets in the regulation of gene expression by ADP-ribosylation and poly (ADP-ribose) polymerases

KW Ryu, DS Kim, WL Kraus - Chemical reviews, 2015 - ACS Publications
In 1963, Chambon et al. reported the detection of a nicotinamide mononucleotide-activated,
DNA-dependent enzymatic activity in rat liver extracts that catalyzed the synthesis of a …

[HTML][HTML] The chromatin response to double-strand DNA breaks and their repair

R Aleksandrov, R Hristova, S Stoynov, A Gospodinov - Cells, 2020 - mdpi.com
Cellular DNA is constantly being damaged by numerous internal and external mutagenic
factors. Probably the most severe type of insults DNA could suffer are the double-strand …

Preserving genome integrity and function: the DNA damage response and histone modifications

JJ Kim, SY Lee, KM Miller - Critical reviews in biochemistry and …, 2019 - Taylor & Francis
Modulation of chromatin templates in response to cellular cues, including DNA damage,
relies heavily on the post-translation modification of histones. Numerous types of histone …

[HTML][HTML] PARP1 orchestrates epigenetic events setting up chromatin domains

F Ciccarone, M Zampieri, P Caiafa - Seminars in cell & developmental …, 2017 - Elsevier
Epigenetic events include reversible modifications of DNA and histone tails driving
chromatin organization and thus transcription. The epigenetic regulation is a highly …