piRNA-guided genome defense: from biogenesis to silencing

B Czech, M Munafò, F Ciabrelli… - Annual review of …, 2018 - annualreviews.org
PIWI-interacting RNAs (piRNAs) and their associated PIWI clade Argonaute proteins
constitute the core of the piRNA pathway. In gonadal cells, this conserved pathway is crucial …

One loop to rule them all: the **-pong cycle and piRNA-guided silencing

B Czech, GJ Hannon - Trends in biochemical sciences, 2016 - cell.com
The PIWI-interacting RNA (piRNA) pathway is a conserved defense mechanism that protects
the genetic information of animal germ cells from the deleterious effects of molecular …

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

JA Law, SE Jacobsen - Nature Reviews Genetics, 2010 - nature.com
Cytosine DNA methylation is a stable epigenetic mark that is crucial for diverse biological
processes, including gene and transposon silencing, imprinting and X chromosome …

piRNA-guided transposon cleavage initiates Zucchini-dependent, phased piRNA production

BW Han, W Wang, C Li, Z Weng, PD Zamore - Science, 2015 - science.org
PIWI-interacting RNAs (piRNAs) protect the animal germ line by silencing transposons.
Primary piRNAs, generated from transcripts of genomic transposon “junkyards”(piRNA …

piRNA-guided slicing specifies transcripts for Zucchini-dependent, phased piRNA biogenesis

F Mohn, D Handler, J Brennecke - Science, 2015 - science.org
In animal gonads, PIWI-clade Argonaute proteins repress transposons sequence-
specifically via bound Piwi-interacting RNAs (piRNAs). These are processed from single …

The genome of Tetranychus urticae reveals herbivorous pest adaptations

M Grbić, T Van Leeuwen, RM Clark, S Rombauts… - Nature, 2011 - nature.com
The spider mite Tetranychus urticae is a cosmopolitan agricultural pest with an extensive
host plant range and an extreme record of pesticide resistance. Here we present the …

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

modENCODE Consortium, S Roy, J Ernst… - Science, 2010 - science.org
To gain insight into how genomic information is translated into cellular and developmental
programs, the Drosophila model organism Encyclopedia of DNA Elements (modENCODE) …

The rhino-deadlock-cutoff complex licenses noncanonical transcription of dual-strand piRNA clusters in Drosophila

F Mohn, G Sienski, D Handler, J Brennecke - Cell, 2014 - cell.com
Argonaute proteins of the PIWI clade are central to transposon silencing in animal gonads.
Their target specificity is defined by 23–30 nt PIWI interacting RNAs (piRNAs), which mostly …

Miwi catalysis is required for piRNA amplification-independent LINE1 transposon silencing

M Reuter, P Berninger, S Chuma, H Shah… - Nature, 2011 - nature.com
Repetitive-element-derived Piwi-interacting RNAs (piRNAs), act together with Piwi proteins
Mili (also known as Piwil2) and Miwi2 (also known as Piwil4) in a genome defence …

Virus discovery by deep sequencing and assembly of virus-derived small silencing RNAs

Q Wu, Y Luo, R Lu, N Lau, EC Lai, WX Li… - Proceedings of the …, 2010 - pnas.org
In response to infection, invertebrates process replicating viral RNA genomes into siRNAs of
discrete sizes to guide virus clearance by RNA interference. Here, we show that viral siRNAs …