Functional insights from glutamate receptor ion channel structures

J Kumar, ML Mayer - Annual review of physiology, 2013 - annualreviews.org
X-ray crystal structures for the soluble amino-terminal and ligand-binding domains of
glutamate receptor ion channels, combined with a 3.6-Å-resolution structure of the full-length …

MMGBSA as a tool to understand the binding affinities of filamin–peptide interactions

M Ylilauri, OT Pentikäinen - Journal of chemical information and …, 2013 - ACS Publications
Filamins (FLN) are large dimeric proteins that cross-link actin and work as important
scaffolds in human cells. FLNs consist of an N-terminal actin-binding domain followed by 24 …

Structure of an agonist-bound ionotropic glutamate receptor

MV Yelshanskaya, M Li, AI Sobolevsky - Science, 2014 - science.org
Ionotropic glutamate receptors (iGluRs) mediate most excitatory neurotransmission in the
central nervous system and function by opening their ion channel in response to binding of …

Structure and gating of tetrameric glutamate receptors

AI Sobolevsky - The Journal of physiology, 2015 - Wiley Online Library
Ionotropic glutamate receptors (iGluRs) are ligand‐gated ion channels that open their ion‐
conducting pores in response to the binding of agonist glutamate. In recent years, significant …

[책][B] Quantum chemistry simulation of biological molecules

EL Albuquerque, UL Fulco, EWS Caetano, VN Freire - 2021 - books.google.com
Nano-biotechnology crosses the boundaries between physics, biochemistry and
bioengineering, and has profound implications for the biomedical engineering industry. This …

[인용][C] Structure, function, and pharmacology of glutamate receptor ion channels

KB Hansen, LP Wollmuth, D Bowie, H Furukawa… - Pharmacological …, 2021 - ASPET

Selective effect of cell membrane on synaptic neurotransmission

PA Postila, I Vattulainen, T Róg - Scientific reports, 2016 - nature.com
Atomistic molecular dynamics simulations were performed with 13 non-peptidic
neurotransmitters (NTs) in three different membrane environments. The results provide …

Conformational transitions in the glycine-bound GluN1 NMDA receptor LBD via single-molecule FRET

DR Cooper, DM Dolino, H Jaurich, B Shuang… - Biophysical journal, 2015 - cell.com
The N-methyl-D-aspartate receptor (NMDAR) is a member of the glutamate receptor family
of proteins and is responsible for excitatory transmission. Activation of the receptor is thought …

Getting docking into shape using negative image-based rescoring

ST Kurkinen, S Lätti, OT Pentikäinen… - Journal of chemical …, 2019 - ACS Publications
The failure of default scoring functions to ensure virtual screening enrichment is a persistent
problem for the molecular docking algorithms used in structure-based drug discovery. To …

Role of the ion channel extracellular collar in AMPA receptor gating

MV Yelshanskaya, S Mesbahi-Vasey, MG Kurnikova… - Scientific Reports, 2017 - nature.com
AMPA subtype ionotropic glutamate receptors mediate fast excitatory neurotransmission and
are implicated in numerous neurological diseases. Ionic currents through AMPA receptor …