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A systematic review of artificial intelligence and machine learning applications to inflammatory bowel disease, with practical guidelines for interpretation
Background Inflammatory bowel disease (IBD) is a gastrointestinal chronic disease with an
unpredictable disease course. Computational methods such as machine learning (ML) have …
unpredictable disease course. Computational methods such as machine learning (ML) have …
Inflammatory bowel disease genomics, transcriptomics, proteomics and metagenomics meet artificial intelligence
Various extrinsic and intrinsic factors such as drug exposures, antibiotic treatments,
smoking, lifestyle, genetics, immune responses, and the gut microbiome characterize …
smoking, lifestyle, genetics, immune responses, and the gut microbiome characterize …
Machine learning for precision diagnostics of autoimmunity
J Kruta, R Carapito, M Trendelenburg, T Martin… - Scientific Reports, 2024 - nature.com
Early and accurate diagnosis is crucial to prevent disease development and define
therapeutic strategies. Due to predominantly unspecific symptoms, diagnosis of autoimmune …
therapeutic strategies. Due to predominantly unspecific symptoms, diagnosis of autoimmune …
On the limits of graph neural networks for the early diagnosis of Alzheimer's disease
Alzheimer's disease (AD) is a neurodegenerative disease whose molecular mechanisms
are activated several years before cognitive symptoms appear. Genotype-based prediction …
are activated several years before cognitive symptoms appear. Genotype-based prediction …
Genome interpretation in a federated learning context allows the multi-center exome-based risk prediction of Crohn's disease patients
High-throughput sequencing allowed the discovery of many disease variants, but nowadays
it is becoming clear that the abundance of genomics data mostly just moved the bottleneck …
it is becoming clear that the abundance of genomics data mostly just moved the bottleneck …
Decoding the effects of synonymous variants
Synonymous single nucleotide variants (sSNVs) are common in the human genome but are
often overlooked. However, sSNVs can have significant biological impact and may lead to …
often overlooked. However, sSNVs can have significant biological impact and may lead to …
Supervised machine learning classifies inflammatory bowel disease patients by subtype using whole exome sequencing data
Background Inflammatory bowel disease [IBD] is a chronic inflammatory disorder with two
main subtypes: Crohn's disease [CD] and ulcerative colitis [UC]. Prompt subtype diagnosis …
main subtypes: Crohn's disease [CD] and ulcerative colitis [UC]. Prompt subtype diagnosis …
Large sample size and nonlinear sparse models outline epistatic effects in inflammatory bowel disease
Background Despite clear evidence of nonlinear interactions in the molecular architecture of
polygenic diseases, linear models have so far appeared optimal in genotype-to-phenotype …
polygenic diseases, linear models have so far appeared optimal in genotype-to-phenotype …
[HTML][HTML] Machine learning modeling from omics data as prospective tool for improvement of inflammatory bowel disease diagnosis and clinical classifications
Research of inflammatory bowel disease (IBD) has identified numerous molecular players
involved in the disease development. Even so, the understanding of IBD is incomplete, while …
involved in the disease development. Even so, the understanding of IBD is incomplete, while …
Advances in inflammatory bowel disease diagnostics: machine learning and genomic profiling reveal key biomarkers for early detection
This study, utilizing high-throughput technologies and Machine Learning (ML), has identified
gene biomarkers and molecular signatures in Inflammatory Bowel Disease (IBD). We could …
gene biomarkers and molecular signatures in Inflammatory Bowel Disease (IBD). We could …