[HTML][HTML] Advances in protein structure prediction and design
The prediction of protein three-dimensional structure from amino acid sequence has been a
grand challenge problem in computational biophysics for decades, owing to its intrinsic …
grand challenge problem in computational biophysics for decades, owing to its intrinsic …
The coming of age of de novo protein design
There are 20200 possible amino-acid sequences for a 200-residue protein, of which the
natural evolutionary process has sampled only an infinitesimal subset. De novo protein …
natural evolutionary process has sampled only an infinitesimal subset. De novo protein …
Protein design: From the aspect of water solubility and stability
Water solubility and structural stability are key merits for proteins defined by the primary
sequence and 3D-conformation. Their manipulation represents important aspects of the …
sequence and 3D-conformation. Their manipulation represents important aspects of the …
Protein assembly by design
Proteins are nature's primary building blocks for the construction of sophisticated molecular
machines and dynamic materials, ranging from protein complexes such as photosystem II …
machines and dynamic materials, ranging from protein complexes such as photosystem II …
Recent advances in de novo protein design: Principles, methods, and applications
The computational de novo protein design is increasingly applied to address a number of
key challenges in biomedicine and biological engineering. Successes in expanding …
key challenges in biomedicine and biological engineering. Successes in expanding …
Accurate design of megadalton-scale two-component icosahedral protein complexes
Nature provides many examples of self-and co-assembling protein-based molecular
machines, including icosahedral protein cages that serve as scaffolds, enzymes, and …
machines, including icosahedral protein cages that serve as scaffolds, enzymes, and …
Protein assembly: versatile approaches to construct highly ordered nanostructures
Nature endows life with a wide variety of sophisticated, synergistic, and highly functional
protein assemblies. Following Nature's inspiration to assemble protein building blocks into …
protein assemblies. Following Nature's inspiration to assemble protein building blocks into …
Amyloid fibrils as building blocks for natural and artificial functional materials
Proteinaceous materials based on the amyloid core structure have recently been discovered
at the origin of biological functionality in a remarkably diverse set of roles, and attention is …
at the origin of biological functionality in a remarkably diverse set of roles, and attention is …
Top-down design of protein architectures with reinforcement learning
As a result of evolutionary selection, the subunits of naturally occurring protein assemblies
often fit together with substantial shape complementarity to generate architectures optimal …
often fit together with substantial shape complementarity to generate architectures optimal …
Hierarchical materials from high information content macromolecular building blocks: construction, dynamic interventions, and prediction
Hierarchical materials that exhibit order over multiple length scales are ubiquitous in nature.
Because hierarchy gives rise to unique properties and functions, many have sought …
Because hierarchy gives rise to unique properties and functions, many have sought …